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This sample attributes table contains sample IDs, visit number, histological type, infection time, body site where sample was collected, analyte type, tumor status, and name of the center which conducted sequencing.

5 Formulär  
pht005928
Beskrivning

pht005928

Alias
UMLS CUI [1,1]
C3846158
Sample ID
Beskrivning

SAMPLE_ID

Datatyp

string

Alias
UMLS CUI [1,1]
C1299222
Visit number
Beskrivning

VISIT

Datatyp

text

Alias
UMLS CUI [1,1]
C1549755
Cell sort
Beskrivning

HISTOLOGICAL_TYPE

Datatyp

text

Alias
UMLS CUI [1,1]
C0700314
Disease status relative to time after infection
Beskrivning

INFECTION_TIME

Datatyp

string

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0449438
UMLS CUI [1,3]
C0439564
UMLS CUI [1,4]
C0687676
UMLS CUI [1,5]
C3714514
Body site where sample was collected
Beskrivning

BODY_SITE

Datatyp

string

Alias
UMLS CUI [1,1]
C0449705
Analyte Type
Beskrivning

ANALYTE_TYPE

Datatyp

string

Alias
UMLS CUI [1,1]
C4744818
Tumor status
Beskrivning

IS_TUMOR

Datatyp

text

Alias
UMLS CUI [1,1]
C0475752
Name of the center which conducted sequencing
Beskrivning

SEQUENCING_CENTER

Datatyp

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C0565990
UMLS CUI [1,3]
C1561491
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Similar models

This sample attributes table contains sample IDs, visit number, histological type, infection time, body site where sample was collected, analyte type, tumor status, and name of the center which conducted sequencing.

5 Formulär
Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
pht005928
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
Sample ID
string
C1299222 (UMLS CUI [1,1])
VISIT
Item
Visit number
text
C1549755 (UMLS CUI [1,1])
Item
Cell sort
text
C0700314 (UMLS CUI [1,1])
HISTOLOGICAL_TYPE
Code List
Cell sort
CL Item
Memory (M)
CL Item
Naive (N)
CL Item
PBMCs (PB)
CL Item
Plasma cells (PC)
INFECTION_TIME
Item
Disease status relative to time after infection
string
C0012634 (UMLS CUI [1,1])
C0449438 (UMLS CUI [1,2])
C0439564 (UMLS CUI [1,3])
C0687676 (UMLS CUI [1,4])
C3714514 (UMLS CUI [1,5])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte Type
string
C4744818 (UMLS CUI [1,1])
Item
Tumor status
text
C0475752 (UMLS CUI [1,1])
IS_TUMOR
Code List
Tumor status
CL Item
Is not a tumor (N)
C0027651 (UMLS CUI [1,1])
C1518422 (UMLS CUI [1,2])
CL Item
Is Tumor (Y)
C0027651 (UMLS CUI [1,1])
SEQUENCING_CENTER
Item
Name of the center which conducted sequencing
string
C1301943 (UMLS CUI [1,1])
C0565990 (UMLS CUI [1,2])
C1561491 (UMLS CUI [1,3])
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