English

This sample attributes table includes body site where sample was collected, analyte type, genotyping and sequencing centers, experimental details, and indicator for sample duplicates.

5 forms  
pht006565
Description

pht006565

Alias
UMLS CUI [1,1]
C3846158
De-identified Sample ID
Description

SAMPLE_ID

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Description

BODY_SITE

Data type

string

Alias
UMLS CUI [1,1]
C0449705
Analyte Type
Description

ANALYTE_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C4744818
Name of the center which conducted genotyping
Description

GENOTYPING_CENTER

Data type

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C0565990
UMLS CUI [1,3]
C1285573
Name of the center which conducted sequencing
Description

DGE_CENTER

Data type

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C0565990
UMLS CUI [1,3]
C1561491
Experimental Details
Description

EXPERIMENTAL DETAILS

Data type

string

Alias
UMLS CUI [1,1]
C0015320
UMLS CUI [1,2]
C1522508
Yes applies to gene expression data that were run in duplicate and have the same ID in the molecular data file
Description

Is Duplicate

Data type

text

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1511726
UMLS CUI [1,3]
C0600140
UMLS CUI [1,4]
C0205173
UMLS CUI [1,5]
C0445247
UMLS CUI [1,6]
C2348585
UMLS CUI [1,7]
C0026382
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Similar models

This sample attributes table includes body site where sample was collected, analyte type, genotyping and sequencing centers, experimental details, and indicator for sample duplicates.

5 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht006565
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified Sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte Type
string
C4744818 (UMLS CUI [1,1])
GENOTYPING_CENTER
Item
Name of the center which conducted genotyping
string
C1301943 (UMLS CUI [1,1])
C0565990 (UMLS CUI [1,2])
C1285573 (UMLS CUI [1,3])
DGE_CENTER
Item
Name of the center which conducted sequencing
string
C1301943 (UMLS CUI [1,1])
C0565990 (UMLS CUI [1,2])
C1561491 (UMLS CUI [1,3])
EXPERIMENTAL DETAILS
Item
Experimental Details
string
C0015320 (UMLS CUI [1,1])
C1522508 (UMLS CUI [1,2])
Item
Yes applies to gene expression data that were run in duplicate and have the same ID in the molecular data file
text
C0017262 (UMLS CUI [1,1])
C1511726 (UMLS CUI [1,2])
C0600140 (UMLS CUI [1,3])
C0205173 (UMLS CUI [1,4])
C0445247 (UMLS CUI [1,5])
C2348585 (UMLS CUI [1,6])
C0026382 (UMLS CUI [1,7])
Is Duplicate
Code List
Yes applies to gene expression data that were run in duplicate and have the same ID in the molecular data file
CL Item
no (no)
CL Item
yes (y)
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