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This sample attributes table contains sample IDs, body site, analyte type, tumor status, DNA source, plate ID, sample well, DNA concentration, volume, and name of the center which conducted genotyping.

5 forms  
pht006194
Description

pht006194

Alias
UMLS CUI [1,1]
C3846158
De-identified Sample ID
Description

SAMPLE_ID

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Description

BODY_SITE

Data type

string

Alias
UMLS CUI [1,1]
C0449705
Analyte Type
Description

ANALYTE_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C4744818
Tumor status
Description

IS_TUMOR

Data type

string

Alias
UMLS CUI [1,1]
C0475752
DNA origin
Description

DNA_SOURCE

Data type

string

Alias
UMLS CUI [1,1]
C0012854
UMLS CUI [1,2]
C3846158
Plate ID that sample was run on
Description

PLATE_ID

Data type

string

Alias
UMLS CUI [1,1]
C1299222
UMLS CUI [1,2]
C1139930
Sample well
Description

WELL

Data type

string

Alias
UMLS CUI [1,1]
C0370003
UMLS CUI [1,2]
C3146287
DNA concentration
Description

CONCENTRATION

Data type

float

Measurement units
  • ng/uL
Alias
UMLS CUI [1,1]
C0012854
UMLS CUI [1,2]
C1446561
ng/uL
Volume
Description

VOLUME

Data type

float

Measurement units
  • uL
Alias
UMLS CUI [1,1]
C2700258
uL
Name of the center which conducted genotyping
Description

GENOTYPING_CENTER

Data type

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C0565990
UMLS CUI [1,3]
C1285573
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Similar models

This sample attributes table contains sample IDs, body site, analyte type, tumor status, DNA source, plate ID, sample well, DNA concentration, volume, and name of the center which conducted genotyping.

5 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht006194
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified Sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
BODY_SITE
Code List
Body site where sample was collected
CL Item
Blood (Blood)
CL Item
Inner oral cavity (Inner oral cavity)
Item
Analyte Type
string
C4744818 (UMLS CUI [1,1])
ANALYTE_TYPE
Code List
Analyte Type
CL Item
DNA (DNA)
Item
Tumor status
string
C0475752 (UMLS CUI [1,1])
IS_TUMOR
Code List
Tumor status
CL Item
No (No)
Item
DNA origin
string
C0012854 (UMLS CUI [1,1])
C3846158 (UMLS CUI [1,2])
DNA_SOURCE
Code List
DNA origin
CL Item
Blood (Blood)
CL Item
Buccal (Buccal)
CL Item
Buffy Coat (Buffy Coat)
CL Item
Mouthwash (Mouthwash)
PLATE_ID
Item
Plate ID that sample was run on
string
C1299222 (UMLS CUI [1,1])
C1139930 (UMLS CUI [1,2])
WELL
Item
Sample well
string
C0370003 (UMLS CUI [1,1])
C3146287 (UMLS CUI [1,2])
CONCENTRATION
Item
DNA concentration
float
C0012854 (UMLS CUI [1,1])
C1446561 (UMLS CUI [1,2])
VOLUME
Item
Volume
float
C2700258 (UMLS CUI [1,1])
Item
Name of the center which conducted genotyping
string
C1301943 (UMLS CUI [1,1])
C0565990 (UMLS CUI [1,2])
C1285573 (UMLS CUI [1,3])
GENOTYPING_CENTER
Code List
Name of the center which conducted genotyping
CL Item
CIDR (CIDR)
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