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This sample attributes data table contains body site, analyte type, and and tumor status.

12 forms  
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. The sample GEO mapping data table includes a mapping of sample IDs to NCBI GEO accession ID. It also contains sample title, platform assay type, GEO platform assay type accession, and sample tissue type.
    3. This sample attributes data table contains body site and analyte type.
    4. This subject consent data table contains subject IDs, consent group information, and biological sex.
    5. This subject sample mapping data table includes a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs.
    6. This subject phenotypes data table contains case control status with respect to clinical diagnosis of a neurological disorder or disease at the time of death, self-reported race, and subject age at enrollment.
    7. This sample attributes data table contains body site, analyte type, and and tumor status.
    8. This sample attributes data table contains body site, analyte type, and and tumor status.
    9. This sample attributes data table contains body site, analyte type, and and tumor status.
    10. This sample attributes data table contains body site, analyte type, and and tumor status.
    11. This sample attributes data table contains body site, analyte type, and and tumor status.
    12. This sample attributes data table contains body site, analyte type, and and tumor status.
pht006727
Description

pht006727

Alias
UMLS CUI [1,1]
C3846158
De-identified Sample ID
Description

SAMPLE_ID

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Analyte type
Description

ANALYTE_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C4744818
Tumor status
Description

IS_TUMOR

Data type

text

Alias
UMLS CUI [1,1]
C0475752
Body site where sample was collected
Description

BODY_SITE

Data type

string

Alias
UMLS CUI [1,1]
C0449705
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Similar models

This sample attributes data table contains body site, analyte type, and and tumor status.

12 forms
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. The sample GEO mapping data table includes a mapping of sample IDs to NCBI GEO accession ID. It also contains sample title, platform assay type, GEO platform assay type accession, and sample tissue type.
    3. This sample attributes data table contains body site and analyte type.
    4. This subject consent data table contains subject IDs, consent group information, and biological sex.
    5. This subject sample mapping data table includes a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs.
    6. This subject phenotypes data table contains case control status with respect to clinical diagnosis of a neurological disorder or disease at the time of death, self-reported race, and subject age at enrollment.
    7. This sample attributes data table contains body site, analyte type, and and tumor status.
    8. This sample attributes data table contains body site, analyte type, and and tumor status.
    9. This sample attributes data table contains body site, analyte type, and and tumor status.
    10. This sample attributes data table contains body site, analyte type, and and tumor status.
    11. This sample attributes data table contains body site, analyte type, and and tumor status.
    12. This sample attributes data table contains body site, analyte type, and and tumor status.
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht006727
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified Sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
ANALYTE_TYPE
Item
Analyte type
string
C4744818 (UMLS CUI [1,1])
Item
Tumor status
text
C0475752 (UMLS CUI [1,1])
IS_TUMOR
Code List
Tumor status
CL Item
Is not a tumor (N)
C0027651 (UMLS CUI [1,1])
C1518422 (UMLS CUI [1,2])
CL Item
Is Tumor (Y)
C0027651 (UMLS CUI [1,1])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
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