English

Sample ID, analyte type, body site where sample was obtained, viral genome type in tumor, viral presence in tumor, histological type of sample, tumor status of sample, NK cell subtype, primary tumor location, sample type, sequencing center, and tumor subtype of participants with endemic Burkitt lymphoma and involved in the "Pathogenesis and Immunity in Endemic Burkitt Lymphoma" project.

5 forms  
pht006099
Description

pht006099

Alias
UMLS CUI [1,1]
C3846158
De-identified sample ID
Description

SAMPLE_ID

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Description

BODY_SITE

Data type

string

Alias
UMLS CUI [1,1]
C0449705
Analyte type
Description

ANALYTE_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C4744818
Tumor status
Description

IS_TUMOR

Data type

text

Alias
UMLS CUI [1,1]
C0475752
Cell or tissue type or subtype of sample
Description

HISTOLOGICAL_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C2347026
UMLS CUI [1,2]
C0007634
UMLS CUI [1,3]
C0332307
UMLS CUI [2,1]
C2347026
UMLS CUI [2,2]
C0007634
UMLS CUI [2,3]
C0449560
UMLS CUI [3,1]
C1292533
UMLS CUI [3,2]
C0332307
UMLS CUI [4,1]
C1292533
UMLS CUI [4,2]
C0449560
Tumor subtype [endemic BL, sporadic BL]
Description

TUMOR_SUBTYPE

Data type

string

Alias
UMLS CUI [1,1]
C0449560
UMLS CUI [1,2]
C0006826
UMLS CUI [1,3]
C1336077
UMLS CUI [1,4]
C0343640
Primary tumor location
Description

PRIMARY_TUMOR_LOCATION

Data type

string

Alias
UMLS CUI [1,1]
C0475447
Sample type
Description

SAMPLE_TYPE

Data type

text

Alias
UMLS CUI [1,1]
C2347029
NK cell subtype
Description

NK_CELL_SUBTYPE

Data type

text

Alias
UMLS CUI [1,1]
C0022688
UMLS CUI [1,2]
C0449560
Viral presence in tumor
Description

EBV_STATUS

Data type

string

Alias
UMLS CUI [1,1]
C0017376
UMLS CUI [1,2]
C0150312
UMLS CUI [1,3]
C0006826
Viral genome type in tumor
Description

EBV_GENOME_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C0017376
UMLS CUI [1,2]
C0332307
UMLS CUI [1,3]
C0006826
Name of the center which conducted sequencing
Description

SEQUENCING_CENTER

Data type

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C5575037
UMLS CUI [1,3]
C1561491
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Similar models

Sample ID, analyte type, body site where sample was obtained, viral genome type in tumor, viral presence in tumor, histological type of sample, tumor status of sample, NK cell subtype, primary tumor location, sample type, sequencing center, and tumor subtype of participants with endemic Burkitt lymphoma and involved in the "Pathogenesis and Immunity in Endemic Burkitt Lymphoma" project.

5 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht006099
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte type
string
C4744818 (UMLS CUI [1,1])
Item
Tumor status
text
C0475752 (UMLS CUI [1,1])
IS_TUMOR
Code List
Tumor status
CL Item
Is not a tumor (N)
C0027651 (UMLS CUI [1,1])
C1518422 (UMLS CUI [1,2])
CL Item
Is Tumor (Y)
C0027651 (UMLS CUI [1,1])
HISTOLOGICAL_TYPE
Item
Cell or tissue type or subtype of sample
string
C2347026 (UMLS CUI [1,1])
C0007634 (UMLS CUI [1,2])
C0332307 (UMLS CUI [1,3])
C2347026 (UMLS CUI [2,1])
C0007634 (UMLS CUI [2,2])
C0449560 (UMLS CUI [2,3])
C1292533 (UMLS CUI [3,1])
C0332307 (UMLS CUI [3,2])
C1292533 (UMLS CUI [4,1])
C0449560 (UMLS CUI [4,2])
TUMOR_SUBTYPE
Item
Tumor subtype [endemic BL, sporadic BL]
string
C0449560 (UMLS CUI [1,1])
C0006826 (UMLS CUI [1,2])
C1336077 (UMLS CUI [1,3])
C0343640 (UMLS CUI [1,4])
PRIMARY_TUMOR_LOCATION
Item
Primary tumor location
string
C0475447 (UMLS CUI [1,1])
SAMPLE_TYPE
Item
Sample type
text
C2347029 (UMLS CUI [1,1])
Item
NK cell subtype
text
C0022688 (UMLS CUI [1,1])
C0449560 (UMLS CUI [1,2])
NK_CELL_SUBTYPE
Code List
NK cell subtype
CL Item
Not aplicapble (N/A)
CL Item
NK2: CD56positive-CD16positive NK cells; NK3: CD56negative-CD16positive NK cells (NK2; NK3)
EBV_STATUS
Item
Viral presence in tumor
string
C0017376 (UMLS CUI [1,1])
C0150312 (UMLS CUI [1,2])
C0006826 (UMLS CUI [1,3])
EBV_GENOME_TYPE
Item
Viral genome type in tumor
string
C0017376 (UMLS CUI [1,1])
C0332307 (UMLS CUI [1,2])
C0006826 (UMLS CUI [1,3])
SEQUENCING_CENTER
Item
Name of the center which conducted sequencing
string
C1301943 (UMLS CUI [1,1])
C5575037 (UMLS CUI [1,2])
C1561491 (UMLS CUI [1,3])
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