Inglês

This subject phenotypes data table includes subject's sex, race, ethnicity, marital status, year of birth, number of children, height, weight, and cryptorchidism and type. Specifically pertaining to TGCT, variables include case control status, subsequent TGCT diagnosis, side of first and second tumor diagnoses, year of first and second TGCT tumor identification, histology, and relatives with TGCT (n=4 variables). Specifically pertaining to EGCT, variables include case control staus, histology and type of first EGCT, and year of first EGCT tumor identification.

5 Formulários  
pht011048
Descrição

pht011048

Alias
UMLS CUI [1,1]
C3846158
Blinded subject id; 12 characters
Descrição

SUBJECT_ID

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0150108
UMLS CUI [1,2]
C2348585
Gender
Descrição

SEX

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0079399
Year of first TGCT/EGCT
Descrição

ref_year

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0439234
UMLS CUI [1,2]
C0205435
UMLS CUI [1,3]
C0011900
UMLS CUI [1,4]
C1336708
UMLS CUI [1,5]
C0262963
Case/control status
Descrição

case_status_TGCT

Tipo de dados

text

Alias
UMLS CUI [1,1]
C3274646
EGCT case/control status
Descrição

case_status_EGCT

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0262963
UMLS CUI [1,2]
C3274646
Did you have a subsequent TGCT diagnosis?
Descrição

case_second_TGCT

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0332282
UMLS CUI [1,2]
C1336708
First tumor type
Descrição

case_first_type

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0205435
UMLS CUI [1,2]
C4263544
Side of first tumor diagnosis
Descrição

case_first_side

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0441987
UMLS CUI [1,2]
C0205435
UMLS CUI [1,3]
C0006826
UMLS CUI [1,4]
C0011900
Year of first tumor diagnosis
Descrição

case_first_year

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0439234
UMLS CUI [1,2]
C0011900
UMLS CUI [1,3]
C0006826
Did first TGCT arise in left or right testis?
Descrição

case_first_TGCT_side

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0205435
UMLS CUI [1,2]
C0441987
UMLS CUI [1,3]
C1280464
UMLS CUI [1,4]
C1336708
Year of first TGCT tumor identification
Descrição

case_tgct_year

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0439234
UMLS CUI [1,2]
C0205435
UMLS CUI [1,3]
C2316983
UMLS CUI [1,4]
C1336708
Histology at first EGCT
Descrição

case_egct_histology

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0019638
UMLS CUI [1,2]
C0205435
UMLS CUI [1,3]
C0262963
EGCT Case type
Descrição

case_status_EGCT_type

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0262963
UMLS CUI [1,2]
C0868928
UMLS CUI [1,3]
C0332307
Year of first EGCT tumor identification
Descrição

case_egct_year

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0439234
UMLS CUI [1,2]
C0205435
UMLS CUI [1,3]
C0262963
UMLS CUI [1,4]
C2316983
Did second TGCT arise in left or right testis?
Descrição

case_second_TGCT_side

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0441987
UMLS CUI [1,2]
C1280464
UMLS CUI [1,3]
C0205436
UMLS CUI [1,4]
C1336708
Year of diagnosis of second TGCT
Descrição

case_second_TGCT_year

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0439234
UMLS CUI [1,2]
C0011900
UMLS CUI [1,3]
C0205436
UMLS CUI [1,4]
C1336708
Ever had 1st degree relative diagnosed with TGCT
Descrição

famhx_ever_1deg

Tipo de dados

text

Alias
UMLS CUI [1,1]
C1517194
UMLS CUI [1,2]
C1336708
Which 1st degree relative with TGCT
Descrição

famhx_rel_1deg

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0332307
UMLS CUI [1,2]
C1517194
UMLS CUI [1,3]
C1336708
Ever had 2nd degree relative diagnosed with TGCT
Descrição

famhx_ever_2deg

Tipo de dados

text

Alias
UMLS CUI [1,1]
C1519210
UMLS CUI [1,2]
C1336708
2nd degree relative with TGCT
Descrição

famhx_rel_2deg

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0332307
UMLS CUI [1,2]
C1519210
UMLS CUI [1,3]
C1336708
Marital status at referral date
Descrição

marital

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0024819
UMLS CUI [1,2]
C0011008
UMLS CUI [1,3]
C0034927
Cryptorchidism
Descrição

medhx_crypt

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0010417
Cryptorchidism laterality
Descrição

medhx_crypt_type

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0010417
UMLS CUI [1,2]
C0925205
Height in inches at time of diagnosis
Descrição

medhx_height

Tipo de dados

text

Unidades de medida
  • inches
Alias
UMLS CUI [1,1]
C0005890
UMLS CUI [1,2]
C0011008
UMLS CUI [1,3]
C0011900
Was height measured or self reported
Descrição

medhx_height_type

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0005890
UMLS CUI [1,2]
C0681906
UMLS CUI [2,1]
C0005890
UMLS CUI [2,2]
C0444706
Weight in lbs at time of referral
Descrição

medhx_weight

Tipo de dados

text

Unidades de medida
  • lbs
Alias
UMLS CUI [1,1]
C0005910
UMLS CUI [1,2]
C0011008
UMLS CUI [1,3]
C0034927
Was weight measured or self reported
Descrição

medhx_weight_type

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0005910
UMLS CUI [1,2]
C0681906
UMLS CUI [2,1]
C0005910
UMLS CUI [2,2]
C0444706
Race
Descrição

race

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0034510
Hispanic ethnicity
Descrição

race_hispanic

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0086409
UMLS CUI [1,2]
C0015031
Number of children prior to referral date
Descrição

rephx_num_child

Tipo de dados

text

Alias
UMLS CUI [1,1]
C2229974
UMLS CUI [1,2]
C0332152
UMLS CUI [1,3]
C0011008
UMLS CUI [1,4]
C0034927
Year of birth
Descrição

yob

Tipo de dados

text

Alias
UMLS CUI [1,1]
C2826771
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Similar models

This subject phenotypes data table includes subject's sex, race, ethnicity, marital status, year of birth, number of children, height, weight, and cryptorchidism and type. Specifically pertaining to TGCT, variables include case control status, subsequent TGCT diagnosis, side of first and second tumor diagnoses, year of first and second TGCT tumor identification, histology, and relatives with TGCT (n=4 variables). Specifically pertaining to EGCT, variables include case control staus, histology and type of first EGCT, and year of first EGCT tumor identification.

5 Formulários
Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de dados
Alias
Item Group
pht011048
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
Blinded subject id; 12 characters
text
C0150108 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Item
Gender
text
C0079399 (UMLS CUI [1,1])
SEX
Code List
Gender
CL Item
Male (1)
C0086582 (UMLS CUI [1,1])
CL Item
Female (2)
C0086287 (UMLS CUI [1,1])
CL Item
Missing (.)
Item
Year of first TGCT/EGCT
text
C0439234 (UMLS CUI [1,1])
C0205435 (UMLS CUI [1,2])
C0011900 (UMLS CUI [1,3])
C1336708 (UMLS CUI [1,4])
C0262963 (UMLS CUI [1,5])
ref_year
Code List
Year of first TGCT/EGCT
CL Item
missing; else, integer (.)
Item
Case/control status
text
C3274646 (UMLS CUI [1,1])
case_status_TGCT
Code List
Case/control status
CL Item
Control (0)
C3274648 (UMLS CUI [1,1])
CL Item
Case (1)
C3274647 (UMLS CUI [1,1])
Item
EGCT case/control status
text
C0262963 (UMLS CUI [1,1])
C3274646 (UMLS CUI [1,2])
case_status_EGCT
Code List
EGCT case/control status
CL Item
Control (0)
C3274648 (UMLS CUI [1,1])
CL Item
Case (1)
C3274647 (UMLS CUI [1,1])
CL Item
Missing (.)
Item
Did you have a subsequent TGCT diagnosis?
text
C0332282 (UMLS CUI [1,1])
C1336708 (UMLS CUI [1,2])
case_second_TGCT
Code List
Did you have a subsequent TGCT diagnosis?
CL Item
No (0)
CL Item
Yes (1)
CL Item
Missing (.)
Item
First tumor type
text
C0205435 (UMLS CUI [1,1])
C4263544 (UMLS CUI [1,2])
case_first_type
Code List
First tumor type
CL Item
TGCT (1)
CL Item
EGCT (2)
CL Item
Missing (.)
Item
Side of first tumor diagnosis
text
C0441987 (UMLS CUI [1,1])
C0205435 (UMLS CUI [1,2])
C0006826 (UMLS CUI [1,3])
C0011900 (UMLS CUI [1,4])
case_first_side
Code List
Side of first tumor diagnosis
CL Item
Left (1)
CL Item
Right (2)
CL Item
Both (3)
CL Item
Extragonadal (4)
CL Item
Missing (.)
Item
Year of first tumor diagnosis
text
C0439234 (UMLS CUI [1,1])
C0011900 (UMLS CUI [1,2])
C0006826 (UMLS CUI [1,3])
case_first_year
Code List
Year of first tumor diagnosis
CL Item
missing; else, 4 digit integer (.)
Item
Did first TGCT arise in left or right testis?
text
C0205435 (UMLS CUI [1,1])
C0441987 (UMLS CUI [1,2])
C1280464 (UMLS CUI [1,3])
C1336708 (UMLS CUI [1,4])
case_first_TGCT_side
Code List
Did first TGCT arise in left or right testis?
CL Item
Control (0)
C3274648 (UMLS CUI [1,1])
CL Item
Left (1)
CL Item
Right (2)
CL Item
Both (3)
CL Item
Extragonadal (4)
CL Item
Unknown (.)
Item
Year of first TGCT tumor identification
text
C0439234 (UMLS CUI [1,1])
C0205435 (UMLS CUI [1,2])
C2316983 (UMLS CUI [1,3])
C1336708 (UMLS CUI [1,4])
case_tgct_year
Code List
Year of first TGCT tumor identification
CL Item
missing; else, 4 digit integer (.)
Item
Histology at first EGCT
text
C0019638 (UMLS CUI [1,1])
C0205435 (UMLS CUI [1,2])
C0262963 (UMLS CUI [1,3])
case_egct_histology
Code List
Histology at first EGCT
CL Item
control (0)
C3274648 (UMLS CUI [1,1])
CL Item
seminoma (1)
CL Item
non-seminoma (2)
CL Item
mixed (3)
CL Item
other (4)
CL Item
spermacytic seminoma (5)
CL Item
unknown (6)
CL Item
right: seminoma, left: non-seminoma (7)
CL Item
right: seminoma, left: mixed (8)
Item
EGCT Case type
text
C0262963 (UMLS CUI [1,1])
C0868928 (UMLS CUI [1,2])
C0332307 (UMLS CUI [1,3])
case_status_EGCT_type
Code List
EGCT Case type
CL Item
Mediastinal (1)
CL Item
Retroperitoneal (2)
CL Item
Extragonadal (3)
CL Item
Missing (.)
Item
Year of first EGCT tumor identification
text
C0439234 (UMLS CUI [1,1])
C0205435 (UMLS CUI [1,2])
C0262963 (UMLS CUI [1,3])
C2316983 (UMLS CUI [1,4])
case_egct_year
Code List
Year of first EGCT tumor identification
CL Item
missing; else, 4 digit integer (.)
Item
Did second TGCT arise in left or right testis?
text
C0441987 (UMLS CUI [1,1])
C1280464 (UMLS CUI [1,2])
C0205436 (UMLS CUI [1,3])
C1336708 (UMLS CUI [1,4])
case_second_TGCT_side
Code List
Did second TGCT arise in left or right testis?
CL Item
Control (0)
C3274648 (UMLS CUI [1,1])
CL Item
Left (1)
CL Item
Right (2)
CL Item
Both (3)
CL Item
Extragonadal (4)
CL Item
Unknown (.)
Item
Year of diagnosis of second TGCT
text
C0439234 (UMLS CUI [1,1])
C0011900 (UMLS CUI [1,2])
C0205436 (UMLS CUI [1,3])
C1336708 (UMLS CUI [1,4])
case_second_TGCT_year
Code List
Year of diagnosis of second TGCT
CL Item
missing; else, 4 digit integer (.)
Item
Ever had 1st degree relative diagnosed with TGCT
text
C1517194 (UMLS CUI [1,1])
C1336708 (UMLS CUI [1,2])
famhx_ever_1deg
Code List
Ever had 1st degree relative diagnosed with TGCT
CL Item
No (0)
CL Item
Yes (1)
CL Item
Unknown (9)
Item
Which 1st degree relative with TGCT
text
C0332307 (UMLS CUI [1,1])
C1517194 (UMLS CUI [1,2])
C1336708 (UMLS CUI [1,3])
famhx_rel_1deg
Code List
Which 1st degree relative with TGCT
CL Item
Father (1)
CL Item
Brother (2)
CL Item
Son (3)
CL Item
Father and Brother (4)
CL Item
2 Brothers (5)
CL Item
Unknown (9)
Item
Ever had 2nd degree relative diagnosed with TGCT
text
C1519210 (UMLS CUI [1,1])
C1336708 (UMLS CUI [1,2])
famhx_ever_2deg
Code List
Ever had 2nd degree relative diagnosed with TGCT
CL Item
No (0)
CL Item
Yes (1)
CL Item
Unknown (9)
Item
2nd degree relative with TGCT
text
C0332307 (UMLS CUI [1,1])
C1519210 (UMLS CUI [1,2])
C1336708 (UMLS CUI [1,3])
famhx_rel_2deg
Code List
2nd degree relative with TGCT
CL Item
grandfather (1)
CL Item
uncle (2)
CL Item
nephew (3)
CL Item
half brother (4)
CL Item
grandson (5)
CL Item
cousin (6)
CL Item
unknown (9)
Item
Marital status at referral date
text
C0024819 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
C0034927 (UMLS CUI [1,3])
marital
Code List
Marital status at referral date
CL Item
Single (1)
CL Item
Married/Living as married (2)
CL Item
Divorced (3)
CL Item
Separated (4)
CL Item
Widowed (5)
CL Item
Missing (9)
Item
Cryptorchidism
text
C0010417 (UMLS CUI [1,1])
medhx_crypt
Code List
Cryptorchidism
CL Item
missing; else, 4 digit integer (.)
Item
Cryptorchidism laterality
text
C0010417 (UMLS CUI [1,1])
C0925205 (UMLS CUI [1,2])
medhx_crypt_type
Code List
Cryptorchidism laterality
CL Item
bilateral (1)
CL Item
unilateral, side unknown (2)
CL Item
unilateral on right (3)
CL Item
unilateral of left (4)
CL Item
laterality unknown (5)
CL Item
missing (9)
Item
Height in inches at time of diagnosis
text
C0005890 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
C0011900 (UMLS CUI [1,3])
medhx_height
Code List
Height in inches at time of diagnosis
CL Item
missing; else, integer (.)
Item
Was height measured or self reported
text
C0005890 (UMLS CUI [1,1])
C0681906 (UMLS CUI [1,2])
C0005890 (UMLS CUI [2,1])
C0444706 (UMLS CUI [2,2])
medhx_height_type
Code List
Was height measured or self reported
CL Item
Measured (1)
CL Item
Self-reported (2)
CL Item
unknown (9)
Item
Weight in lbs at time of referral
text
C0005910 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
C0034927 (UMLS CUI [1,3])
medhx_weight
Code List
Weight in lbs at time of referral
CL Item
missing; else, integer (.)
Item
Was weight measured or self reported
text
C0005910 (UMLS CUI [1,1])
C0681906 (UMLS CUI [1,2])
C0005910 (UMLS CUI [2,1])
C0444706 (UMLS CUI [2,2])
medhx_weight_type
Code List
Was weight measured or self reported
CL Item
Measured (1)
CL Item
Self-reported (2)
CL Item
unknown (9)
Item
Race
text
C0034510 (UMLS CUI [1,1])
race
Code List
Race
CL Item
White (1)
CL Item
Black (2)
CL Item
Asian (3)
CL Item
Native American (4)
CL Item
Other (5)
CL Item
Missing (9)
Item
Hispanic ethnicity
text
C0086409 (UMLS CUI [1,1])
C0015031 (UMLS CUI [1,2])
race_hispanic
Code List
Hispanic ethnicity
CL Item
Non-Hispanic (0)
CL Item
Hispanic (1)
CL Item
Unknown (9)
Item
Number of children prior to referral date
text
C2229974 (UMLS CUI [1,1])
C0332152 (UMLS CUI [1,2])
C0011008 (UMLS CUI [1,3])
C0034927 (UMLS CUI [1,4])
rephx_num_child
Code List
Number of children prior to referral date
CL Item
missing; else, integer (.)
Item
Year of birth
text
C2826771 (UMLS CUI [1,1])
yob
Code List
Year of birth
CL Item
missing; else, 4 digit integer (.)
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