The dataset contains data describing participants' case/control status, HIV risk group (Latent Class Analysis, LCA), several LCA indicators (e.g. multiple partners, needle sharing, STD), viral load, and provides basic socio-demographic information. Note that multiple measurements (over time) are reported for some variables.

pht002650
Beschrijving

pht002650

Alias
UMLS CUI [1,1]
C3846158
Subject ID
Beschrijving

subjid

Datatype

string

Alias
UMLS CUI [1,1]
C2348585
Consent group as determined by DAC
Beschrijving

consent

Datatype

text

Alias
UMLS CUI [1,1]
C0021430
Case - control status of the subject
Beschrijving

affection_status

Datatype

text

Alias
UMLS CUI [1,1]
C3274646
HIV status
Beschrijving

hivstat

Datatype

text

Alias
UMLS CUI [1,1]
C0458074
Viral Load Copies/mL
Beschrijving

ViralLoad_cperml

Datatype

float

Alias
UMLS CUI [1,1]
C1168369
Viral Log 10
Beschrijving

ViralLoad_Log10

Datatype

float

Alias
UMLS CUI [1,1]
C1168369
UMLS CUI [1,2]
C3873230
Participant reported sex
Beschrijving

sex

Datatype

text

Alias
UMLS CUI [1,1]
C0079399
Self-reported ancestry of participant
Beschrijving

race

Datatype

text

Alias
UMLS CUI [1,1]
C0015031
Reported age of participant
Beschrijving

age

Datatype

text

Maateenheden
  • Years
Alias
UMLS CUI [1,1]
C0001779
Years
Age strata used in frequency matching (</=37, 38-45, 46+)
Beschrijving

age_cat

Datatype

text

Alias
UMLS CUI [1,1]
C3846158
Year participated in UHS (1986-2002)
Beschrijving

year

Datatype

text

Alias
UMLS CUI [1,1]
C3846158
Year strata used in frequency matching (</= 1994; 1995+)
Beschrijving

year_cat

Datatype

text

Alias
UMLS CUI [1,1]
C3846158
Latent Class Analysis (LCA) assigned HIV risk group used in frequency matching
Beschrijving

lca_group

Datatype

text

Alias
UMLS CUI [1,1]
C4704739
UMLS CUI [1,2]
C0744979
Multiple sex partners in the past year, indicator used in LCA
Beschrijving

mpartners

Datatype

text

Alias
UMLS CUI [1,1]
C0558265
UMLS CUI [1,2]
C4086728
Ever had sexually transmitted disease (excluding HIV), indicator used in LCA
Beschrijving

stis

Datatype

text

Alias
UMLS CUI [1,1]
C0036916
UMLS CUI [1,2]
C0332300
UMLS CUI [1,3]
C0019682
Had receptive anal sex in the past 6 months, indicator used in LCA
Beschrijving

anal

Datatype

text

Alias
UMLS CUI [1,1]
C0282347
UMLS CUI [1,2]
C3828652
Sharing needles in the past 30 days, indicator used in LCA
Beschrijving

needleshare

Datatype

text

Alias
UMLS CUI [1,1]
C0085091
UMLS CUI [1,2]
C4331910
Participant ever traded sex for drugs or money, indicator used in LCA
Beschrijving

sexwork

Datatype

text

Alias
UMLS CUI [1,1]
C0033595
Blinded site indicator - site 1 vs. 2
Beschrijving

site

Datatype

text

Alias
UMLS CUI [1,1]
C3846158
Serum Sample ID
Beschrijving

sampid

Datatype

text

Alias
UMLS CUI [1,1]
C5237951
UMLS CUI [1,2]
C1550100
Genotype identified sex
Beschrijving

gwassex

Datatype

text

Alias
UMLS CUI [1,1]
C5236416
Record identified as individual appearing multiple times as inadvertant duplicate.
Beschrijving

cluster

Datatype

text

Alias
UMLS CUI [1,1]
C0460112
UMLS CUI [1,2]
C0679646
Unique individual who was selected for inclusion in the investigators' final analysis data set, based on passing QC and having complete phenotype and covariate data.
Beschrijving

final_analysis

Datatype

text

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0679646

Similar models

The dataset contains data describing participants' case/control status, HIV risk group (Latent Class Analysis, LCA), several LCA indicators (e.g. multiple partners, needle sharing, STD), viral load, and provides basic socio-demographic information. Note that multiple measurements (over time) are reported for some variables.

Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht002650
C3846158 (UMLS CUI [1,1])
subjid
Item
Subject ID
string
C2348585 (UMLS CUI [1,1])
consent
Item
Consent group as determined by DAC
text
C0021430 (UMLS CUI [1,1])
affection_status
Item
Case - control status of the subject
text
C3274646 (UMLS CUI [1,1])
hivstat
Item
HIV status
text
C0458074 (UMLS CUI [1,1])
ViralLoad_cperml
Item
Viral Load Copies/mL
float
C1168369 (UMLS CUI [1,1])
ViralLoad_Log10
Item
Viral Log 10
float
C1168369 (UMLS CUI [1,1])
C3873230 (UMLS CUI [1,2])
sex
Item
Participant reported sex
text
C0079399 (UMLS CUI [1,1])
race
Item
Self-reported ancestry of participant
text
C0015031 (UMLS CUI [1,1])
age
Item
Reported age of participant
text
C0001779 (UMLS CUI [1,1])
age_cat
Item
Age strata used in frequency matching (</=37, 38-45, 46+)
text
C3846158 (UMLS CUI [1,1])
year
Item
Year participated in UHS (1986-2002)
text
C3846158 (UMLS CUI [1,1])
year_cat
Item
Year strata used in frequency matching (</= 1994; 1995+)
text
C3846158 (UMLS CUI [1,1])
lca_group
Item
Latent Class Analysis (LCA) assigned HIV risk group used in frequency matching
text
C4704739 (UMLS CUI [1,1])
C0744979 (UMLS CUI [1,2])
mpartners
Item
Multiple sex partners in the past year, indicator used in LCA
text
C0558265 (UMLS CUI [1,1])
C4086728 (UMLS CUI [1,2])
stis
Item
Ever had sexually transmitted disease (excluding HIV), indicator used in LCA
text
C0036916 (UMLS CUI [1,1])
C0332300 (UMLS CUI [1,2])
C0019682 (UMLS CUI [1,3])
anal
Item
Had receptive anal sex in the past 6 months, indicator used in LCA
text
C0282347 (UMLS CUI [1,1])
C3828652 (UMLS CUI [1,2])
needleshare
Item
Sharing needles in the past 30 days, indicator used in LCA
text
C0085091 (UMLS CUI [1,1])
C4331910 (UMLS CUI [1,2])
sexwork
Item
Participant ever traded sex for drugs or money, indicator used in LCA
text
C0033595 (UMLS CUI [1,1])
site
Item
Blinded site indicator - site 1 vs. 2
text
C3846158 (UMLS CUI [1,1])
sampid
Item
Serum Sample ID
text
C5237951 (UMLS CUI [1,1])
C1550100 (UMLS CUI [1,2])
gwassex
Item
Genotype identified sex
text
C5236416 (UMLS CUI [1,1])
cluster
Item
Record identified as individual appearing multiple times as inadvertant duplicate.
text
C0460112 (UMLS CUI [1,1])
C0679646 (UMLS CUI [1,2])
final_analysis
Item
Unique individual who was selected for inclusion in the investigators' final analysis data set, based on passing QC and having complete phenotype and covariate data.
text
C1512693 (UMLS CUI [1,1])
C0679646 (UMLS CUI [1,2])