Englisch

Sample ID, tumor status of sample, histological type, histological subtype, tumor location, tumor stage, tumor grade, pathological staging of sample (pT) based on tumor characteristics, pathological staging of sample (pN) based on lymph node invasion, tumor size, presence of perinerual invasion, and analyte type of participants with pancreatic ductal adenocarcinoma and involved in the "Genome Sequencing of Pancreatic Ductal Adenocarcinoma at The Human Genome Sequencing Center of Baylor College of Medicine (HGSC-BCM)" project.

5 Formulare  
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. Subject ID, subject source, source subject ID, consent group, and affection status of participants with pancreatic ductal adenocarcinoma and involved in the "Genome Sequencing of Pancreatic Ductal Adenocarcinoma at The Human Genome Sequencing Center of Baylor College of Medicine (HGSC-BCM)" project.
    3. Subject ID, sample ID, sample source, source sample ID, and sample use variable obtained from participants with pancreatic ductal adenocarcinoma and involved in the "Genome Sequencing of Pancreatic Ductal Adenocarcinoma at The Human Genome Sequencing Center of Baylor College of Medicine (HGSC-BCM)" project.
    4. Subject ID, sex, age, smoking, amount the subject smoked, drinking, diabetes, BMI, family history of malignancy, status of subject at time of writing, follow up period after surgery, and subject's cause of death of participants with pancreatic ductal adenocarcinoma and involved in the "Genome Sequencing of Pancreatic Ductal Adenocarcinoma at The Human Genome Sequencing Center of Baylor College of Medicine (HGSC-BCM)" project.
    5. Sample ID, tumor status of sample, histological type, histological subtype, tumor location, tumor stage, tumor grade, pathological staging of sample (pT) based on tumor characteristics, pathological staging of sample (pN) based on lymph node invasion, tumor size, presence of perinerual invasion, and analyte type of participants with pancreatic ductal adenocarcinoma and involved in the "Genome Sequencing of Pancreatic Ductal Adenocarcinoma at The Human Genome Sequencing Center of Baylor College of Medicine (HGSC-BCM)" project.
pht002831
Beschreibung

pht002831

De-identified Sample ID
Beschreibung

SAMPID

Datentyp

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Tumor status of sample
Beschreibung

IS_TUMOR

Datentyp

text

Alias
UMLS CUI [1,1]
C0475752
Cell or tissue type of sample
Beschreibung

HISTOLOGICAL_TYPE

Datentyp

string

Alias
UMLS CUI [1,1]
C2713035
Cell or tissue subtype of sample
Beschreibung

HISTOLOGICAL_SUBTYPE

Datentyp

string

Alias
UMLS CUI [1,1]
C2713035
UMLS CUI [1,2]
C0449560
Location of tumor within the pancreas
Beschreibung

tumor_location

Datentyp

text

Alias
UMLS CUI [1,1]
C0027651
UMLS CUI [1,2]
C0450429
UMLS CUI [1,3]
C0030274
Tumor stage of sample
Beschreibung

TUMOR_STAGE

Datentyp

string

Alias
UMLS CUI [1,1]
C1300072
UMLS CUI [1,2]
C0370003
Tumor grade of sample
Beschreibung

TUMOR_GRADE

Datentyp

string

Alias
UMLS CUI [1,1]
C0370003
UMLS CUI [1,2]
C0475753
Pathological staging of sample (pT) based on tumor characteristics
Beschreibung

pT_staging

Datentyp

string

Alias
UMLS CUI [1,1]
C0443276
UMLS CUI [1,2]
C1272834
Pathological staging of sample (pN) based on lymph node invasion
Beschreibung

pN_staging

Datentyp

string

Alias
UMLS CUI [1,1]
C0443276
UMLS CUI [1,2]
C1272833
Tumor Size
Beschreibung

tumor_size

Datentyp

float

Maßeinheiten
  • cm
Alias
UMLS CUI [1,1]
C0475440
cm
Presence of perinerual invasion
Beschreibung

perineural_invasion

Datentyp

text

Alias
UMLS CUI [1,1]
C1300724
Presence of lymphovascular invasion
Beschreibung

lymphovascular_invasion

Datentyp

text

Alias
UMLS CUI [1,1]
C1708790
Analyte Type
Beschreibung

ANALYTE_TYPE

Datentyp

string

Alias
UMLS CUI [1,1]
C4744818
Sample Use
Beschreibung

SAMPLE_USE

Datentyp

text

Alias
UMLS CUI [1,1]
C1524063
UMLS CUI [1,2]
C0370003
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Ähnliche Modelle

Sample ID, tumor status of sample, histological type, histological subtype, tumor location, tumor stage, tumor grade, pathological staging of sample (pT) based on tumor characteristics, pathological staging of sample (pN) based on lymph node invasion, tumor size, presence of perinerual invasion, and analyte type of participants with pancreatic ductal adenocarcinoma and involved in the "Genome Sequencing of Pancreatic Ductal Adenocarcinoma at The Human Genome Sequencing Center of Baylor College of Medicine (HGSC-BCM)" project.

5 Formulare
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. Subject ID, subject source, source subject ID, consent group, and affection status of participants with pancreatic ductal adenocarcinoma and involved in the "Genome Sequencing of Pancreatic Ductal Adenocarcinoma at The Human Genome Sequencing Center of Baylor College of Medicine (HGSC-BCM)" project.
    3. Subject ID, sample ID, sample source, source sample ID, and sample use variable obtained from participants with pancreatic ductal adenocarcinoma and involved in the "Genome Sequencing of Pancreatic Ductal Adenocarcinoma at The Human Genome Sequencing Center of Baylor College of Medicine (HGSC-BCM)" project.
    4. Subject ID, sex, age, smoking, amount the subject smoked, drinking, diabetes, BMI, family history of malignancy, status of subject at time of writing, follow up period after surgery, and subject's cause of death of participants with pancreatic ductal adenocarcinoma and involved in the "Genome Sequencing of Pancreatic Ductal Adenocarcinoma at The Human Genome Sequencing Center of Baylor College of Medicine (HGSC-BCM)" project.
    5. Sample ID, tumor status of sample, histological type, histological subtype, tumor location, tumor stage, tumor grade, pathological staging of sample (pT) based on tumor characteristics, pathological staging of sample (pN) based on lymph node invasion, tumor size, presence of perinerual invasion, and analyte type of participants with pancreatic ductal adenocarcinoma and involved in the "Genome Sequencing of Pancreatic Ductal Adenocarcinoma at The Human Genome Sequencing Center of Baylor College of Medicine (HGSC-BCM)" project.
Name
Typ
Description | Question | Decode (Coded Value)
Datentyp
Alias
Item Group
pht002831
SAMPID
Item
De-identified Sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
Item
Tumor status of sample
text
C0475752 (UMLS CUI [1,1])
IS_TUMOR
Code List
Tumor status of sample
CL Item
Is not a tumor (N)
CL Item
Is Tumor (Y)
HISTOLOGICAL_TYPE
Item
Cell or tissue type of sample
string
C2713035 (UMLS CUI [1,1])
HISTOLOGICAL_SUBTYPE
Item
Cell or tissue subtype of sample
string
C2713035 (UMLS CUI [1,1])
C0449560 (UMLS CUI [1,2])
Item
Location of tumor within the pancreas
text
C0027651 (UMLS CUI [1,1])
C0450429 (UMLS CUI [1,2])
C0030274 (UMLS CUI [1,3])
tumor_location
Code List
Location of tumor within the pancreas
CL Item
Head of Pancreas (H)
CL Item
Not Applicable (N/A)
CL Item
Tail of Pancreas (T)
TUMOR_STAGE
Item
Tumor stage of sample
string
C1300072 (UMLS CUI [1,1])
C0370003 (UMLS CUI [1,2])
TUMOR_GRADE
Item
Tumor grade of sample
string
C0370003 (UMLS CUI [1,1])
C0475753 (UMLS CUI [1,2])
pT_staging
Item
Pathological staging of sample (pT) based on tumor characteristics
string
C0443276 (UMLS CUI [1,1])
C1272834 (UMLS CUI [1,2])
pN_staging
Item
Pathological staging of sample (pN) based on lymph node invasion
string
C0443276 (UMLS CUI [1,1])
C1272833 (UMLS CUI [1,2])
tumor_size
Item
Tumor Size
float
C0475440 (UMLS CUI [1,1])
Item
Presence of perinerual invasion
text
C1300724 (UMLS CUI [1,1])
perineural_invasion
Code List
Presence of perinerual invasion
CL Item
No (N)
CL Item
Not Applicable (N/A)
CL Item
Yes (Y)
Item
Presence of lymphovascular invasion
text
C1708790 (UMLS CUI [1,1])
lymphovascular_invasion
Code List
Presence of lymphovascular invasion
CL Item
No (N)
CL Item
Not Applicable (N/A)
CL Item
Yes (Y)
ANALYTE_TYPE
Item
Analyte Type
string
C4744818 (UMLS CUI [1,1])
SAMPLE_USE
Item
Sample Use
text
C1524063 (UMLS CUI [1,1])
C0370003 (UMLS CUI [1,2])
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