The subject sample data table contains mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes a mapping of sample IDs to other sample ID aliases and sample use.

pht003116
Beschrijving

pht003116

Subject ID
Beschrijving

SUBJID

Datatype

string

Alias
UMLS CUI [1,1]
C2348585
Sample ID
Beschrijving

SAMPID

Datatype

string

Alias
UMLS CUI [1,1]
C1299222
Source repository where samples originate
Beschrijving

SAMP_SOURCE

Datatype

string

Alias
UMLS CUI [1,1]
C0449416
UMLS CUI [1,2]
C3847505
UMLS CUI [1,3]
C0205313
Sample ID used in the Source Repository
Beschrijving

SOURCE_SAMPID

Datatype

string

Alias
UMLS CUI [1,1]
C1299222
Sample use
Beschrijving

SAMPLE_USE

Datatype

text

Alias
UMLS CUI [1,1]
C0200345
UMLS CUI [1,2]
C1524063

Similar models

The subject sample data table contains mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes a mapping of sample IDs to other sample ID aliases and sample use.

Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht003116
SUBJID
Item
Subject ID
string
C2348585 (UMLS CUI [1,1])
SAMPID
Item
Sample ID
string
C1299222 (UMLS CUI [1,1])
SAMP_SOURCE
Item
Source repository where samples originate
string
C0449416 (UMLS CUI [1,1])
C3847505 (UMLS CUI [1,2])
C0205313 (UMLS CUI [1,3])
SOURCE_SAMPID
Item
Sample ID used in the Source Repository
string
C1299222 (UMLS CUI [1,1])
Item
Sample use
text
C0200345 (UMLS CUI [1,1])
C1524063 (UMLS CUI [1,2])
Code List
Sample use
CL Item
Whole genome sequencing data available through SRA (WGS_SRA)