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The subject phenotype data table includes sociodemography variables (n=2; age and race), disease status (n=2; disease and onset age), tumor stage and grade (n=3), and presence or absence of somatic mutations (n=3; BAP1, PBRM1, VHL).

5 Formulaires  
pht002699
Description

pht002699

De-identified Subject ID
Description

SUBJID

Type de données

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Disease onset age
Description

Age

Type de données

text

Unités de mesure
  • years
Alias
UMLS CUI [1,1]
C0574845
UMLS CUI [1,2]
C0001779
years
Gender of participant
Description

Sex

Type de données

text

Alias
UMLS CUI [1,1]
C0079399
Body Mass Index
Description

BMI

Type de données

float

Alias
UMLS CUI [1,1]
C1305855
Race of participant
Description

Race

Type de données

string

Alias
UMLS CUI [1,1]
C0034510
Disease of the patient
Description

Disease

Type de données

string

Alias
UMLS CUI [1,1]
C0012634
TNM staging
Description

TNM

Type de données

string

Alias
UMLS CUI [1,1]
C1300492
Stage
Description

Stage

Type de données

string

Alias
UMLS CUI [1,1]
C0449394
Fuhrman grade
Description

Grade

Type de données

text

Alias
UMLS CUI [1,1]
C0007134
UMLS CUI [1,2]
C0439165
UMLS CUI [1,3]
C1522609
UMLS CUI [1,4]
C1300579
Somatic mutation in BAP1 (Entrez GeneID: 8314)
Description

BAP1

Type de données

string

Alias
UMLS CUI [1,1]
C0544886
UMLS CUI [1,2]
C1332380
Somatic mutation in PBRM1 (Entrez GeneID: 55193)
Description

PBRM1

Type de données

string

Alias
UMLS CUI [1,1]
C0544886
UMLS CUI [1,2]
C1853685
Somatic mutation in VHL (Entrez GeneID: 7428)
Description

VHL

Type de données

string

Alias
UMLS CUI [1,1]
C0544886
UMLS CUI [1,2]
C0694897
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Similar models

The subject phenotype data table includes sociodemography variables (n=2; age and race), disease status (n=2; disease and onset age), tumor stage and grade (n=3), and presence or absence of somatic mutations (n=3; BAP1, PBRM1, VHL).

5 Formulaires
Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht002699
SUBJID
Item
De-identified Subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Age
Item
Disease onset age
text
C0574845 (UMLS CUI [1,1])
C0001779 (UMLS CUI [1,2])
Item
Gender of participant
text
C0079399 (UMLS CUI [1,1])
Sex
Code List
Gender of participant
CL Item
Female (F)
CL Item
Male (M)
CL Item
Not applicable (NA)
CL Item
Unknown (UNK)
BMI
Item
Body Mass Index
float
C1305855 (UMLS CUI [1,1])
Item
Race of participant
string
C0034510 (UMLS CUI [1,1])
Race
Code List
Race of participant
CL Item
African American (African American)
CL Item
Asian (Asian)
CL Item
Caucasian (Caucasian)
CL Item
Hispanic (Hispanic)
CL Item
Non-hispanic (Non-hispanic)
CL Item
White (White)
CL Item
Native American (Native American)
Item
Disease of the patient
string
C0012634 (UMLS CUI [1,1])
Disease
Code List
Disease of the patient
CL Item
Clear-cell renal cell carcinoma (Clear-cell renal cell carcinoma)
TNM
Item
TNM staging
string
C1300492 (UMLS CUI [1,1])
Stage
Item
Stage
string
C0449394 (UMLS CUI [1,1])
Grade
Item
Fuhrman grade
text
C0007134 (UMLS CUI [1,1])
C0439165 (UMLS CUI [1,2])
C1522609 (UMLS CUI [1,3])
C1300579 (UMLS CUI [1,4])
BAP1
Item
Somatic mutation in BAP1 (Entrez GeneID: 8314)
string
C0544886 (UMLS CUI [1,1])
C1332380 (UMLS CUI [1,2])
PBRM1
Item
Somatic mutation in PBRM1 (Entrez GeneID: 55193)
string
C0544886 (UMLS CUI [1,1])
C1853685 (UMLS CUI [1,2])
VHL
Item
Somatic mutation in VHL (Entrez GeneID: 7428)
string
C0544886 (UMLS CUI [1,1])
C0694897 (UMLS CUI [1,2])
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