The data table contains mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes a mapping of sample IDs to other sample ID aliases and sample use (SNP_Array, WES_SRA, WGS_SRA, and totRNA_Expression).

pht002698
Description

pht002698

Subject ID
Description

SUBJID

Type de données

string

Alias
UMLS CUI [1,1]
C2348585
Sample ID
Description

SAMPID

Type de données

string

Alias
UMLS CUI [1,1]
C1299222
Sample Use. SNP_Array: SNP genotypes obtained using standard or custom microarrays; WES_SRA: Whole exome sequencing data available through SRA; WGS_SRA: Whole genome sequencing data available through SRA; totRNA_Expression: Expression data for total RNA sample (array data)
Description

SAMPLE_USE

Type de données

text

Alias
UMLS CUI [1,1]
C1524063
UMLS CUI [1,2]
C2347026
UMLS CUI [2,1]
C0752046
UMLS CUI [2,2]
C0017431
UMLS CUI [3,1]
C3640076
UMLS CUI [4,1]
C0035668
UMLS CUI [4,2]
C0017262
UMLS CUI [4,3]
C1511726

Similar models

The data table contains mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes a mapping of sample IDs to other sample ID aliases and sample use (SNP_Array, WES_SRA, WGS_SRA, and totRNA_Expression).

Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht002698
SUBJID
Item
Subject ID
string
C2348585 (UMLS CUI [1,1])
SAMPID
Item
Sample ID
string
C1299222 (UMLS CUI [1,1])
SAMPLE_USE
Item
Sample Use. SNP_Array: SNP genotypes obtained using standard or custom microarrays; WES_SRA: Whole exome sequencing data available through SRA; WGS_SRA: Whole genome sequencing data available through SRA; totRNA_Expression: Expression data for total RNA sample (array data)
text
C1524063 (UMLS CUI [1,1])
C2347026 (UMLS CUI [1,2])
C0752046 (UMLS CUI [2,1])
C0017431 (UMLS CUI [2,2])
C3640076 (UMLS CUI [3,1])
C0035668 (UMLS CUI [4,1])
C0017262 (UMLS CUI [4,2])
C1511726 (UMLS CUI [4,3])