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This sample attributes table includes body site where sample was collected, analyte type, histological type, tumor status, and type of sample preservation prior to DNA or RNA extraction.

7 forms  
pht002710
Description

pht002710

De-identified Sample ID
Description

SAMPLE_ID

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Description

BODY_SITE

Data type

string

Alias
UMLS CUI [1,1]
C1515974
UMLS CUI [1,2]
C0200345
Cell or tissue type or subtype of sample
Description

HISTOLOGICAL_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C0449475
UMLS CUI [1,2]
C2713035
UMLS CUI [1,3]
C0449560
Tumor status
Description

IS_TUMOR

Data type

text

Alias
UMLS CUI [1,1]
C0475752
Sample preservation prior to DNA or RNA extraction
Description

PRESERVATION

Data type

string

Alias
UMLS CUI [1,1]
C1879845
UMLS CUI [1,2]
C0332152
UMLS CUI [1,3]
C0012854
UMLS CUI [1,4]
C0035668
UMLS CUI [1,5]
C0185115
Analyte: DNA or RNA
Description

ANALYTE

Data type

string

Alias
UMLS CUI [1,1]
C4744818
UMLS CUI [1,2]
C0035668
UMLS CUI [2,1]
C4744818
UMLS CUI [2,2]
C0012854
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Similar models

This sample attributes table includes body site where sample was collected, analyte type, histological type, tumor status, and type of sample preservation prior to DNA or RNA extraction.

7 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht002710
SAMPLE_ID
Item
De-identified Sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected
string
C1515974 (UMLS CUI [1,1])
C0200345 (UMLS CUI [1,2])
HISTOLOGICAL_TYPE
Item
Cell or tissue type or subtype of sample
string
C0449475 (UMLS CUI [1,1])
C2713035 (UMLS CUI [1,2])
C0449560 (UMLS CUI [1,3])
Item
Tumor status
text
C0475752 (UMLS CUI [1,1])
IS_TUMOR
Code List
Tumor status
CL Item
Is not a tumor (N)
CL Item
Is Tumor (Y)
PRESERVATION
Item
Sample preservation prior to DNA or RNA extraction
string
C1879845 (UMLS CUI [1,1])
C0332152 (UMLS CUI [1,2])
C0012854 (UMLS CUI [1,3])
C0035668 (UMLS CUI [1,4])
C0185115 (UMLS CUI [1,5])
ANALYTE
Item
Analyte: DNA or RNA
string
C4744818 (UMLS CUI [1,1])
C0035668 (UMLS CUI [1,2])
C4744818 (UMLS CUI [2,1])
C0012854 (UMLS CUI [2,2])
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