Inglés

This data table contains a mapping of sample ID to NCBI GEO accessions.

6 formularios  
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. This data table contains subject IDs and consent group information. The data table also includes a mapping of subject IDs to other subject ID aliases.
    3. The data table contains a mapping of subject ID to sample ID. Samples are the final preps submitted for sequencing. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes a mapping of sample IDs to other sample ID aliases.
    4. This subject phenotype table includes subjects diagnosed with retinoblastoma. The variables are was the disease sporadic or inherited, age at diagnosis, additional information regarding molecular testing, primary treatment protocol, relapse information, bone marrow transplant status, presence of genetic lesions, tumor purity, type of specimen and site where tissue was extracted. Additionally, there are 2 sociodemography variables: gender and ethnicity.
    5. This sample attributes table includes variables indicating the tumor/normal status, the body site where the sample was extracted, sample analyte type, histological type, primary tumor location, and whether sample was a xenograft. Note: the primary tumor location refers to the subject's primary tumor location and is independent from where the sample was extracted.
    6. This data table contains a mapping of sample ID to NCBI GEO accessions.
pht002354
Descripción

pht002354

Sample ID
Descripción

SAMPID

Tipo de datos

string

Alias
UMLS CUI [1,1]
C1299222
GEO accession ID
Descripción

GEO_ACCESSION

Tipo de datos

string

Alias
UMLS CUI [1,1]
C2348585
UMLS CUI [1,2]
C1555308
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Similar models

This data table contains a mapping of sample ID to NCBI GEO accessions.

6 formularios
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. This data table contains subject IDs and consent group information. The data table also includes a mapping of subject IDs to other subject ID aliases.
    3. The data table contains a mapping of subject ID to sample ID. Samples are the final preps submitted for sequencing. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes a mapping of sample IDs to other sample ID aliases.
    4. This subject phenotype table includes subjects diagnosed with retinoblastoma. The variables are was the disease sporadic or inherited, age at diagnosis, additional information regarding molecular testing, primary treatment protocol, relapse information, bone marrow transplant status, presence of genetic lesions, tumor purity, type of specimen and site where tissue was extracted. Additionally, there are 2 sociodemography variables: gender and ethnicity.
    5. This sample attributes table includes variables indicating the tumor/normal status, the body site where the sample was extracted, sample analyte type, histological type, primary tumor location, and whether sample was a xenograft. Note: the primary tumor location refers to the subject's primary tumor location and is independent from where the sample was extracted.
    6. This data table contains a mapping of sample ID to NCBI GEO accessions.
Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de datos
Alias
Item Group
pht002354
SAMPID
Item
Sample ID
string
C1299222 (UMLS CUI [1,1])
GEO_ACCESSION
Item
GEO accession ID
string
C2348585 (UMLS CUI [1,1])
C1555308 (UMLS CUI [1,2])
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