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The sample attributes table includes the body site, analyte type, and tumor status.

6 Formulieren  
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. This subject consent data table includes subject IDs, consent group information, and subject aliases.
    3. This pedigree data table includes family relationships in the format of family IDs, subject IDs, father IDs, mother IDs, sex of subjects, and twin IDs for monozygotic twins. Please note that if a couple did not have children, the submitters created a dummy child to link the couple in a pedigree. The gender of a dummy child was set as missing.
    4. This subject sample mapping data table includes a mapping of study subject IDs to sample IDs and sample aliases. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. Several subjects gave permission to share their DNA results, but not their phenotypes.
    5. This subject phenotype table includes sociodemographic information (n=7 variables), medical history (n=12 variables; historical height, self-reported history, and reproductive physiological processes), physical observations (n=12 variables; subject's age, blood pressure, anthropometric measurements, hearing, eyesight, physical status, lung spirometry), disease diagnosis (n=33 variables), laboratory measurements (n=17 variables), Mini-Mental State Exam (MMSE) (n=9 variables), level of physical activity (n=3 variables), surgery and treatment (n=5 variables), and smoking status (n=7 variables). Several subjects gave permission to share their DNA results, but not their phenotypes.
    6. The sample attributes table includes the body site, analyte type, and tumor status.
pht003356
Beschrijving

pht003356

DNA Sample ID
Beschrijving

Collected in Visit 1 & Visit 2

Datatype

text

Alias
UMLS CUI [1,1]
C1299222
UMLS CUI [1,2]
C0012854
Body site where sample was collected
Beschrijving

Collected in Visit 1 & Visit 2

Datatype

text

Alias
UMLS CUI [1,1]
C0005902
UMLS CUI [1,2]
C2825164
UMLS CUI [1,3]
C0200345
Analyte type
Beschrijving

Collected in Visit 1 & Visit 2

Datatype

text

Alias
UMLS CUI [1,1]
C0443354
UMLS CUI [1,2]
C0332307
Tumor status
Beschrijving

Collected in Visit 1 & Visit 2

Datatype

text

Alias
UMLS CUI [1,1]
C0475752
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Similar models

The sample attributes table includes the body site, analyte type, and tumor status.

6 Formulieren
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. This subject consent data table includes subject IDs, consent group information, and subject aliases.
    3. This pedigree data table includes family relationships in the format of family IDs, subject IDs, father IDs, mother IDs, sex of subjects, and twin IDs for monozygotic twins. Please note that if a couple did not have children, the submitters created a dummy child to link the couple in a pedigree. The gender of a dummy child was set as missing.
    4. This subject sample mapping data table includes a mapping of study subject IDs to sample IDs and sample aliases. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. Several subjects gave permission to share their DNA results, but not their phenotypes.
    5. This subject phenotype table includes sociodemographic information (n=7 variables), medical history (n=12 variables; historical height, self-reported history, and reproductive physiological processes), physical observations (n=12 variables; subject's age, blood pressure, anthropometric measurements, hearing, eyesight, physical status, lung spirometry), disease diagnosis (n=33 variables), laboratory measurements (n=17 variables), Mini-Mental State Exam (MMSE) (n=9 variables), level of physical activity (n=3 variables), surgery and treatment (n=5 variables), and smoking status (n=7 variables). Several subjects gave permission to share their DNA results, but not their phenotypes.
    6. The sample attributes table includes the body site, analyte type, and tumor status.
Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht003356
sampid
Item
DNA Sample ID
text
C1299222 (UMLS CUI [1,1])
C0012854 (UMLS CUI [1,2])
Item
Body site where sample was collected
text
C0005902 (UMLS CUI [1,1])
C2825164 (UMLS CUI [1,2])
C0200345 (UMLS CUI [1,3])
body_site
Code List
Body site where sample was collected
CL Item
blood (1)
CL Item
saliva (2)
CL Item
both (3)
analyte_type
Item
Analyte type
text
C0443354 (UMLS CUI [1,1])
C0332307 (UMLS CUI [1,2])
is_tumor
Item
Tumor status
text
C0475752 (UMLS CUI [1,1])
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