SAMPID
Item
De-identified Sample ID
string
C2346787 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
Sample Type
Item
Indicates the Tumor / Normal status of a sample
string
C5237802 (UMLS CUI [1,1])
Tissue Site
Item
General body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
Tumor Percent
Item
Estimated percent of nucleated cells that consist of tumor cells (determined by BSP if tissue sample QC'd, but may be provided by collaborator on samples BSP does not review)
text
C5204475 (UMLS CUI [1,1])
C1180059 (UMLS CUI [1,2])
Cancer Stage
Item
Stage of Cancer as appropriate for cancer type
string
C1300072 (UMLS CUI [1,1])
Tumor Type
Item
Sample taken from Primary or Secondary/Metastatic tumor
string
C0370003 (UMLS CUI [1,1])
C0677930 (UMLS CUI [1,2])
C2939420 (UMLS CUI [1,3])
BSP Notes
Item
Comments on tissue from BSP path. Review or additional notes submitted by the collaborator
string
C5190064 (UMLS CUI [1,1])
Fibroblast and Vessel Percent
Item
Estimated percent of nucleated cells that consist of fibroblasts and vessels (determined by BSP if tissue sample QC'd, but may be provided by collaborator on samples BSP does not review)
text
C0750572 (UMLS CUI [1,1])
C0439165 (UMLS CUI [1,2])
C1180059 (UMLS CUI [1,3])
C0016030 (UMLS CUI [1,4])
C0005847 (UMLS CUI [1,5])
Inflammation Percent
Item
Estimated percent of nucleated cells that consist of inflammatory cells (determined by BSP if tissue sample QC'd, but may be provided by collaborator on samples BSP does not review)
text
C0750572 (UMLS CUI [1,1])
C0439165 (UMLS CUI [1,2])
C1180059 (UMLS CUI [1,3])
C0440752 (UMLS CUI [1,4])
Necrosis Percent
Item
Estimated percent of the tissue specimen that is necrotic (relative indicator of specimen quality)
text
C0750572 (UMLS CUI [1,1])
C0439165 (UMLS CUI [1,2])
C0370003 (UMLS CUI [1,3])
C0027540 (UMLS CUI [1,4])