Liver Events - Biopsy

  1. StudyEvent: ODM
    1. Liver Events - Biopsy
Administrative Data
Description

Administrative Data

Alias
UMLS CUI-1
C1320722
Subject Number
Description

Subject Number

Data type

integer

Alias
UMLS CUI [1]
C2348585
Date/Time of Assessment
Description

Date/Time of Assessment

Data type

datetime

Alias
UMLS CUI [1,1]
C2985720
UMLS CUI [1,2]
C1264639
Liver Biopsy
Description

Liver Biopsy

Alias
UMLS CUI-1
C0193388
Date of liver biopsy
Description

Date of liver biopsy

Data type

date

Alias
UMLS CUI [1,1]
C0193388
UMLS CUI [1,2]
C0011008
Approximate size of liver biopsy
Description

size of liver biopsy

Data type

integer

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C1299482
UMLS CUI [1,2]
C0193388
mm
Biopsy size unit [hidden]
Description

[hidden] prefilled with "mm"

Data type

text

Alias
UMLS CUI [1,1]
C1299482
UMLS CUI [1,2]
C1519795
UMLS CUI [1,3]
C0193388
Final Diagnosis
Description

Final Diagnosis

Alias
UMLS CUI-1
C1546485
UMLS CUI-2
C0193388
Final Diagnosis
Description

Final Diagnosis

Data type

text

Alias
UMLS CUI [1,1]
C1546485
UMLS CUI [1,2]
C0193388
Acute hepatitis
Description

Acute hepatitis

Data type

boolean

Alias
UMLS CUI [1]
C0267797
Chronic hepatitis
Description

Chronic hepatitis

Data type

boolean

Alias
UMLS CUI [1]
C0019189
Cholestatic hepatitis
Description

Cholestatic hepatitis

Data type

boolean

Alias
UMLS CUI [1]
C0149904
Drug-induced cholestasis
Description

Drug-induced cholestasis

Data type

boolean

Alias
UMLS CUI [1]
C2062350
Acute viral hepatitis
Description

Acute viral hepatitis

Data type

boolean

Alias
UMLS CUI [1]
C0276622
Chronic viral hepatitis
Description

Chronic viral hepatitis

Data type

boolean

Alias
UMLS CUI [1]
C0276623
Drug-induced hepatitis
Description

Drug-induced hepatitis

Data type

boolean

Alias
UMLS CUI [1]
C1262760
Autoimmune hepatitis
Description

Autoimmune hepatitis

Data type

boolean

Alias
UMLS CUI [1]
C0241910
Bridging necrosis
Description

Liver Bridging necrosis

Data type

boolean

Alias
UMLS CUI [1,1]
C0333511
UMLS CUI [1,2]
C0023884
Submassive hepatic necrosis
Description

Submassive hepatic necrosis

Data type

boolean

Alias
UMLS CUI [1]
C0151798
Massive hepatic necrosis
Description

Massive hepatic necrosis

Data type

boolean

Alias
UMLS CUI [1]
C0001364
Steatosis - microvesicular
Description

Steatosis - microvesicular

Data type

boolean

Alias
UMLS CUI [1]
C1850415
Steatosis - macrovesicular
Description

Steatosis - macrovesicular

Data type

boolean

Alias
UMLS CUI [1]
C1837256
Steatosis - mixed
Description

Steatosis - mixed

Data type

boolean

Alias
UMLS CUI [1,1]
C0015695
UMLS CUI [1,2]
C0205430
Non-alcoholic steatohepatitis
Description

Non-alcoholic steatohepatitis

Data type

boolean

Alias
UMLS CUI [1]
C3241937
Alcoholic hepatitis
Description

Alcoholic hepatitis

Data type

boolean

Alias
UMLS CUI [1]
C0019187
Hepatic granulomas
Description

Hepatic granulomas

Data type

boolean

Alias
UMLS CUI [1]
C0745754
Sarcoidosis
Description

Liver Sarcoidosis

Data type

boolean

Alias
UMLS CUI [1]
C0744822
Fibrosis
Description

Liver Fibrosis

Data type

boolean

Alias
UMLS CUI [1]
C0239946
Cirrhosis
Description

Cirrhosis

Data type

boolean

Alias
UMLS CUI [1]
C0023890
Primary biliary cirrhosis
Description

Primary biliary cirrhosis

Data type

boolean

Alias
UMLS CUI [1]
C0008312
Primary sclerosing cholangitis
Description

Primary sclerosing cholangitis

Data type

boolean

Alias
UMLS CUI [1]
C0008311
Autoimmune overlap syndrome
Description

Autoimmune overlap syndrome

Data type

boolean

Alias
UMLS CUI [1]
C2702837
Hemochromatosis
Description

Hemochromatosis

Data type

boolean

Alias
UMLS CUI [1]
C0018995
Alpha-1-antitrypsin deficiency
Description

Alpha-1-antitrypsin deficiency

Data type

boolean

Alias
UMLS CUI [1]
C0221757
Wilson's disease
Description

Wilson's disease

Data type

boolean

Alias
UMLS CUI [1]
C0019202
Veno-occlusive disease
Description

Liver: Veno-occlusive disease

Data type

boolean

Alias
UMLS CUI [1]
C0019156
Budd-Chiari syndrome
Description

Budd-Chiari syndrome

Data type

boolean

Alias
UMLS CUI [1]
C0856761
Neoplasia
Description

Liver Neoplasia

Data type

boolean

Alias
UMLS CUI [1,1]
C1882062
UMLS CUI [1,2]
C0023884
Other Final Diagnosis
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C1546485
UMLS CUI [1,2]
C0205394
Other Final Diagnosis specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C1546485
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C2348235
Liver Architecture
Description

Liver Architecture

Alias
UMLS CUI-1
C0023884
UMLS CUI-2
C0935919
UMLS CUI-3
C0193388
Liver Architecture normal?
Description

If no, please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0023884
UMLS CUI [1,2]
C0935919
UMLS CUI [1,3]
C0205307
Bridging fibrosis
Description

Bridging fibrosis

Data type

boolean

Alias
UMLS CUI [1]
C0334160
Diffuse fibrosis
Description

Diffuse fibrosis

Data type

boolean

Alias
UMLS CUI [1,1]
C0016059
UMLS CUI [1,2]
C0205219
Nodular regenerative hyperplasia
Description

Nodular regenerative hyperplasia

Data type

boolean

Alias
UMLS CUI [1]
C4048264
Congenital hepatic fibrosis
Description

Congenital hepatic fibrosis

Data type

boolean

Alias
UMLS CUI [1]
C0009714
Cirrhosis
Description

Cirrhosis

Data type

boolean

Alias
UMLS CUI [1]
C0023890
Centrilobular congestion
Description

Centrilobular congestion

Data type

boolean

Alias
UMLS CUI [1]
C0519014
Endophlebitis
Description

Endophlebitis

Data type

boolean

Alias
UMLS CUI [1]
C0014234
Veno-occlusive disease
Description

Veno-occlusive disease

Data type

boolean

Alias
UMLS CUI [1]
C0948441
Canalicular cholestasis
Description

Canalicular cholestasis

Data type

boolean

Alias
UMLS CUI [1]
C3150342
Apoptosis
Description

Apoptosis

Data type

boolean

Alias
UMLS CUI [1]
C0162638
Focal (or spotty or mild ) hepatocellular necrosis
Description

Focal hepatocellular necrosis

Data type

boolean

Alias
UMLS CUI [1,1]
C1855038
UMLS CUI [1,2]
C0205234
lnterface hepatitis (periportal hepatitis or piecemealnecrosis)
Description

lnterface hepatitis

Data type

boolean

Alias
UMLS CUI [1]
C5139205
lschaemic necrosis
Description

lschaemic necrosis

Data type

boolean

Alias
UMLS CUI [1,1]
C0027540
UMLS CUI [1,2]
C0475224
Centrolobular (Zone 3) necrosis
Description

Centrolobular necrosis

Data type

boolean

Alias
UMLS CUI [1,1]
C0027540
UMLS CUI [1,2]
C0682619
Focal coagulative necrosis
Description

Focal coagulative necrosis

Data type

boolean

Alias
UMLS CUI [1,1]
C1522058
UMLS CUI [1,2]
C0205234
Centrolobular (Zone 3) coagulative necrosis
Description

Centrolobular coagulative necrosis

Data type

boolean

Alias
UMLS CUI [1,1]
C1522058
UMLS CUI [1,2]
C0682619
Bridging hepatocellular necrosis
Description

Bridging hepatocellular necrosis

Data type

boolean

Alias
UMLS CUI [1,1]
C1855038
UMLS CUI [1,2]
C0333511
Massive or panlobular hepatocellular necrosis
Description

Massive or panlobular hepatocellular necrosis

Data type

boolean

Alias
UMLS CUI [1,1]
C1855038
UMLS CUI [1,2]
C0522501
UMLS CUI [2,1]
C1855038
UMLS CUI [2,2]
C0442131
Dysplasia liver
Description

Dysplasia liver

Data type

boolean

Alias
UMLS CUI [1,1]
C0334044
UMLS CUI [1,2]
C0023884
Neoplasia liver
Description

Neoplasia liver

Data type

boolean

Alias
UMLS CUI [1,1]
C1882062
UMLS CUI [1,2]
C0023884
Other Liver Architecture
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0023884
UMLS CUI [1,2]
C0935919
UMLS CUI [1,3]
C0205394
Specify Other Liver Architecture
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C0023884
UMLS CUI [1,2]
C0935919
UMLS CUI [1,3]
C0205394
UMLS CUI [1,4]
C2348235
Description of Liver Cells or Hepatocytes
Description

Description of Liver Cells or Hepatocytes

Alias
UMLS CUI-1
C0227525
UMLS CUI-2
C0678257
Normal Liver Cells or Hepatocytes
Description

if no, please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0227525
UMLS CUI [1,2]
C0205307
Ballooning
Description

Ballooning Hepatocytes

Data type

boolean

Alias
UMLS CUI [1,1]
C0333445
UMLS CUI [1,2]
C0227525
Acidophilic
Description

Acidophilic Hepatocytes

Data type

boolean

Alias
UMLS CUI [1,1]
C0227525
UMLS CUI [1,2]
C0333931
Pseudoxanthomatous
Description

Pseudoxanthomatous Hepatocytes

Data type

boolean

Alias
UMLS CUI [1,1]
C0227525
UMLS CUI [1,2]
C2348205
UMLS CUI [1,3]
C1710694
Multinucleated giant hepatocytes
Description

Multinucleated giant hepatocytes

Data type

boolean

Alias
UMLS CUI [1,1]
C1850414
UMLS CUI [1,2]
C0227525
Other Hepatocyte Description
Description

Please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0227525
UMLS CUI [1,2]
C0205394
Other Hepatocytes specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C1521902
UMLS CUI [1,2]
C0227525
UMLS CUI [1,3]
C0205394
Liver Cell or Hepatocyte Inclusions or Vacuoles
Description

Liver Cell or Hepatocyte Inclusions or Vacuoles

Alias
UMLS CUI-1
C0227525
UMLS CUI-2
C0042219
UMLS CUI-3
C0227525
UMLS CUI-4
C0007637
Liver Cell or Hepatocyte Inclusions or Vacuoles?
Description

if yes, check all inclusions/vacuoles that apply

Data type

boolean

Alias
UMLS CUI [1,1]
C0227525
UMLS CUI [1,2]
C0042219
UMLS CUI [2,1]
C0227525
UMLS CUI [2,2]
C0007637
Macrovesicular steatosis
Description

Macrovesicular steatosis

Data type

boolean

Alias
UMLS CUI [1]
C1837256
Microvesicular steatosis
Description

Microvesicular steatosis

Data type

boolean

Alias
UMLS CUI [1]
C1850415
Bile accumulation
Description

Bile accumulation

Data type

boolean

Alias
UMLS CUI [1]
C3686784
Diastase-resistant, PAS-positive cytoplasmic inclusions
Description

Diastase-resistant, PAS-positive cytoplasmic inclusions

Data type

boolean

Alias
UMLS CUI [1]
C1856311
Alpha-1-antitrypsin inclusions
Description

Alpha-1-antitrypsin inclusions

Data type

boolean

Alias
UMLS CUI [1,1]
C0002191
UMLS CUI [1,2]
C0007637
Megamitochondria
Description

Megamitochondria

Data type

boolean

Alias
UMLS CUI [1,1]
C0549177
UMLS CUI [1,2]
C0026237
Mallory bodies
Description

Mallory bodies

Data type

boolean

Alias
UMLS CUI [1]
C0333744
Ground Glass inclusions
Description

Ground Glass inclusions

Data type

boolean

Alias
UMLS CUI [1,1]
C4697773
UMLS CUI [1,2]
C0007637
Lipofuscin pigment
Description

Lipofuscin pigment

Data type

boolean

Alias
UMLS CUI [1]
C0023789
Hemosiderin granules
Description

Hemosiderin granules

Data type

boolean

Alias
UMLS CUI [1,1]
C0019113
UMLS CUI [1,2]
C3853628
Orcein positive cytoplasmin granules
Description

Orcein positive cytoplasmin granules

Data type

boolean

Alias
UMLS CUI [1,1]
C0069596
UMLS CUI [1,2]
C3853628
Protoporphyrin crystals (birefringent under polarised light)
Description

Protoporphyrin crystals

Data type

boolean

Alias
UMLS CUI [1,1]
C0033733
UMLS CUI [1,2]
C0444626
Uroporphyrin crystals (red fluorescence under ultraviolet light)
Description

Uroporphyrin crystals

Data type

boolean

Alias
UMLS CUI [1,1]
C0042093
UMLS CUI [1,2]
C0444626
Other Hepatocyte Inclusions or Vacuoles
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C0227525
UMLS CUI [1,3]
C0042219
UMLS CUI [2,1]
C0205394
UMLS CUI [2,2]
C0227525
UMLS CUI [2,3]
C0007637
Other Hepatocyte Inclusions or Vacuoles Specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C0227525
UMLS CUI [1,3]
C0042219
UMLS CUI [1,4]
C2348235
UMLS CUI [2,1]
C0205394
UMLS CUI [2,2]
C0227525
UMLS CUI [2,3]
C0007637
UMLS CUI [2,4]
C2348235
Hepatocyte or Liver Cell Nuclear Abnormalities
Description

Hepatocyte or Liver Cell Nuclear Abnormalities

Alias
UMLS CUI-1
C0227525
UMLS CUI-2
C1849376
Hepatocyte or Liver Cell Nuclear Abnormalities
Description

If yes, please check all that apply

Data type

boolean

Alias
UMLS CUI [1,1]
C0227525
UMLS CUI [1,2]
C1849376
Hepatocellular mitosis
Description

Hepatocellular mitosis

Data type

boolean

Alias
UMLS CUI [1,1]
C0026255
UMLS CUI [1,2]
C2697585
Binucleated or multinucleated hepatocytes
Description

Binucleated or multinucleated hepatocytes

Data type

boolean

Alias
UMLS CUI [1,1]
C0333909
UMLS CUI [1,2]
C0227525
UMLS CUI [2]
C4054455
CMV inclusion bodies
Description

CMV inclusion bodies

Data type

boolean

Alias
UMLS CUI [1,1]
C0010825
UMLS CUI [1,2]
C0007637
HSV inclusions
Description

HSV inclusions

Data type

boolean

Alias
UMLS CUI [1,1]
C0319232
UMLS CUI [1,2]
C0007637
Varicella inclusions
Description

Varicella inclusions

Data type

boolean

Alias
UMLS CUI [1,1]
C0740380
UMLS CUI [1,2]
C0007637
Other Hepatocyte Nuclear Abnormalities
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C0227525
UMLS CUI [1,3]
C1849376
Other Hepatocyte Nuclear Abnormalities Specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C0227525
UMLS CUI [1,3]
C1849376
UMLS CUI [1,4]
C2348235
Liver or Lobular Infiltrates
Description

Liver or Lobular Infiltrates

Alias
UMLS CUI-1
C0205417
UMLS CUI-2
C1400896
UMLS CUI-3
C1400896
Liver or Lobular Infiltrates
Description

if yes, check all that apply

Data type

boolean

Alias
UMLS CUI [1,1]
C0205417
UMLS CUI [1,2]
C1400896
UMLS CUI [2]
C1400896
Eosinophils
Description

Liver or Lobular Infiltrates Eosinophils

Data type

boolean

Alias
UMLS CUI [1,1]
C0205417
UMLS CUI [1,2]
C1400896
UMLS CUI [1,3]
C0014467
UMLS CUI [2,1]
C1400896
UMLS CUI [2,2]
C0014467
Lymphocytes
Description

Liver or Lobular Infiltrates Lymphocytes

Data type

boolean

Alias
UMLS CUI [1,1]
C0205417
UMLS CUI [1,2]
C1400896
UMLS CUI [1,3]
C0024264
UMLS CUI [2,1]
C1400896
UMLS CUI [2,2]
C0024264
Plasma cells
Description

Liver or Lobular Infiltrates Plasma cells

Data type

boolean

Alias
UMLS CUI [1,1]
C0205417
UMLS CUI [1,2]
C1400896
UMLS CUI [1,3]
C0032112
UMLS CUI [2,1]
C1400896
UMLS CUI [2,2]
C0032112
Neutrophils
Description

Liver or Lobular Infiltrates Neutrophils

Data type

boolean

Alias
UMLS CUI [1,1]
C0205417
UMLS CUI [1,2]
C1400896
UMLS CUI [1,3]
C0027950
UMLS CUI [2,1]
C1400896
UMLS CUI [2,2]
C0027950
Macrophages and proliferating Kupffer cells
Description

Liver or Lobular Infiltrates Macrophages and proliferating Kupffer cells

Data type

boolean

Alias
UMLS CUI [1,1]
C0205417
UMLS CUI [1,2]
C1400896
UMLS CUI [1,3]
C0022801
UMLS CUI [2,1]
C1400896
UMLS CUI [2,2]
C0022801
UMLS CUI [3,1]
C0205417
UMLS CUI [3,2]
C1400896
UMLS CUI [3,3]
C1168262
UMLS CUI [4,1]
C1400896
UMLS CUI [4,2]
C1168262
Granulomas
Description

Liver or Lobular Infiltrates Granulomas

Data type

boolean

Alias
UMLS CUI [1,1]
C0745754
UMLS CUI [1,2]
C0205417
UMLS CUI [2]
C0745754
Other Liver or Lobular Infiltrates
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0205417
UMLS CUI [1,2]
C1400896
UMLS CUI [1,3]
C0205394
UMLS CUI [2,1]
C1400896
UMLS CUI [2,2]
C0205394
Other Liver or Lobular Infiltrates specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C0205417
UMLS CUI [1,2]
C1400896
UMLS CUI [1,3]
C0205394
UMLS CUI [1,4]
C1521902
UMLS CUI [2,1]
C1400896
UMLS CUI [2,2]
C0205394C1521902
Portal Tract Inflammation
Description

Portal Tract Inflammation

Alias
UMLS CUI-1
C3854488
UMLS CUI-2
C0193388
Portal Tract Inflammation
Description

if yes, check all that apply

Data type

boolean

Alias
UMLS CUI [1]
C3854488
Eosinophils
Description

Eosinophils

Data type

boolean

Alias
UMLS CUI [1,1]
C0014467
UMLS CUI [1,2]
C3854488
Lymphoid aggregates and/or follicles
Description

Lymphoid aggregates and/or follicles

Data type

boolean

Alias
UMLS CUI [1,1]
C0229653
UMLS CUI [1,2]
C3854488
UMLS CUI [2,1]
C3854488
UMLS CUI [2,2]
C1518071
UMLS CUI [2,3]
C1571705
Plasma cells
Description

Plasma cells

Data type

boolean

Alias
UMLS CUI [1,1]
C0032112
UMLS CUI [1,2]
C3854488
Neutrophils
Description

Neutrophils

Data type

boolean

Alias
UMLS CUI [1,1]
C0027950
UMLS CUI [1,2]
C3854488
Histocytes and macrophages
Description

Histocytes and macrophages

Data type

boolean

Alias
UMLS CUI [1,1]
C0024432
UMLS CUI [1,2]
C3854488
UMLS CUI [2,1]
C3854488
UMLS CUI [2,2]
C0019612
Other Portal Tract Inflammation
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C3854488
UMLS CUI [1,2]
C0205394
Other Portal Tract Inflammation specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C3854488
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C2348235
Bile Ducts
Description

Bile Ducts

Alias
UMLS CUI-1
C0005400
Bile Ducts normal?
Description

If no, check all that apply

Data type

boolean

Alias
UMLS CUI [1,1]
C0005400
UMLS CUI [1,2]
C0205307
Proliferation of bile ducts (bile ductular reaction)
Description

Proliferation of bile ducts

Data type

boolean

Alias
UMLS CUI [1,1]
C0005400
UMLS CUI [1,2]
C0334094
Dilation, degeneration or disruption of portal bile ducts
Description

Dilation, degeneration or disruption of portal bile ducts

Data type

boolean

Alias
UMLS CUI [1,1]
C0005400
UMLS CUI [1,2]
C0011164
UMLS CUI [2]
C1849767
UMLS CUI [3,1]
C0005400
UMLS CUI [3,2]
C0332453
Paucity of bile ducts
Description

Paucity of bile ducts

Data type

boolean

Alias
UMLS CUI [1]
C4273160
Periductal fibrosis
Description

Periductal fibrosis

Data type

boolean

Alias
UMLS CUI [1,1]
C0016059
UMLS CUI [1,2]
C1282914
UMLS CUI [1,3]
C0005400
Other Bile ducts abnormality
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C1704258
UMLS CUI [1,3]
C0005400
Other Bile ducts abnormality specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C1704258
UMLS CUI [1,3]
C0005400
UMLS CUI [1,4]
C2348235
Portal Veins
Description

Portal Veins

Alias
UMLS CUI-1
C0032718
Portal Veins normal?
Description

If no, check all that apply

Data type

boolean

Alias
UMLS CUI [1,1]
C0032718
UMLS CUI [1,2]
C0205307
Pyelophlebitis
Description

Pyelophlebitis

Data type

boolean

Alias
UMLS CUI [1,1]
C1405883
UMLS CUI [1,2]
C0032718
Thrombosis, sclerosis or occlusion of portal vein
Description

Thrombosis, sclerosis or occlusion of portal vein

Data type

boolean

Alias
UMLS CUI [1]
C0155773
UMLS CUI [2]
C0400960
UMLS CUI [3]
C0265029
Neoplastic invasion of portal vein
Description

Neoplastic invasion of portal vein

Data type

boolean

Alias
UMLS CUI [1,1]
C1709160
UMLS CUI [1,2]
C1510886
UMLS CUI [1,3]
C0032718
Granulomatous compression of portal vein
Description

Granulomatous compression of portal vein

Data type

boolean

Alias
UMLS CUI [1,1]
C0032718
UMLS CUI [1,2]
C0439667
UMLS CUI [1,3]
C0728907
Other Portal veins Abnormality
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0032718
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C1704258
Other Portal veins Abnormality specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C0032718
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C1704258
UMLS CUI [1,4]
C2348235
Liver Infections
Description

Liver Infections

Alias
UMLS CUI-1
C1112211
UMLS CUI-2
C0193388
Liver Infections
Description

If yes, check all that apply

Data type

boolean

Alias
UMLS CUI [1]
C1112211
Leishmaniasis donovani
Description

Leishmaniasis donovani

Data type

boolean

Alias
UMLS CUI [1]
C0023281
Plasmodium falciparum
Description

Plasmodium falciparum

Data type

boolean

Alias
UMLS CUI [1]
C0032150
Toxoplasmosis
Description

Toxoplasmosis

Data type

boolean

Alias
UMLS CUI [1]
C0040558
Cryptococcus neoformans
Description

Cryptococcus neoformans

Data type

boolean

Alias
UMLS CUI [1]
C0010416
Histoplasma capsulatum
Description

Histoplasma capsulatum

Data type

boolean

Alias
UMLS CUI [1]
C0319941
Mycobacterium tuberculois
Description

Mycobacterium tuberculois

Data type

boolean

Alias
UMLS CUI [1]
C0026926
Other mycobacterial species
Description

Other mycobacterial species

Data type

boolean

Alias
UMLS CUI [1]
C1265234
Other Liver Infection
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C1112211
Other Liver Infection specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C1112211
UMLS CUI [1,3]
C2348235
K. Parasites or Ova
Description

K. Parasites or Ova

Alias
UMLS CUI-1
C0030498
UMLS CUI-2
C1267673
UMLS CUI-3
C0193388
Parasites or Ova?
Description

if yes, check all that apply

Data type

boolean

Alias
UMLS CUI [1,1]
C0030498
UMLS CUI [1,2]
C0193388
UMLS CUI [2,1]
C1267673
UMLS CUI [2,2]
C0193388
Schistosome and/or ova
Description

Schistosome and/or ova

Data type

boolean

Alias
UMLS CUI [1,1]
C0036315
UMLS CUI [1,2]
C0193388
UMLS CUI [2,1]
C4303012
UMLS CUI [2,2]
C0193388
Ascaris and/or ova
Description

Ascaris and/or ova

Data type

boolean

Alias
UMLS CUI [1,1]
C3698183
UMLS CUI [1,2]
C0193388
UMLS CUI [2,1]
C0003954
UMLS CUI [2,2]
C0193388
Toxocara and/or ova
Description

Toxocara and/or ova

Data type

boolean

Alias
UMLS CUI [1,1]
C0040550
UMLS CUI [1,2]
C0193388
UMLS CUI [2,1]
C0040550
UMLS CUI [2,2]
C1267673
UMLS CUI [2,3]
C0193388
Echinococcus cysts
Description

Echinococcus cysts

Data type

boolean

Alias
UMLS CUI [1,1]
C0013502
UMLS CUI [1,2]
C0193388
Hepatic capillariasis worms and/or ova
Description

Hepatic capillariasis worms and/or ova

Data type

boolean

Alias
UMLS CUI [1,1]
C0277202
UMLS CUI [1,2]
C0193388
UMLS CUI [2,1]
C0006896
UMLS CUI [2,2]
C1267673
UMLS CUI [2,3]
C0193388
Other Parasites or Ova
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C1267673
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0193388
UMLS CUI [2,1]
C0030498
UMLS CUI [2,2]
C0205394
UMLS CUI [2,3]
C0193388
Other Parasites or Ova specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C1267673
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0193388
UMLS CUI [1,4]
C2348235
UMLS CUI [2,1]
C0030498
UMLS CUI [2,2]
C0205394
UMLS CUI [2,3]
C0193388
UMLS CUI [2,4]
C2348235
Histologic Staining or Additional Studies Obtained
Description

Histologic Staining or Additional Studies Obtained

Alias
UMLS CUI-1
C0487602
UMLS CUI-2
C0193388
UMLS CUI-3
C1524062
UMLS CUI-4
C0430022
UMLS CUI-5
C0193388
Haematoxylin and eosin (or H & E)
Description

Haematoxylin and eosin

Data type

boolean

Alias
UMLS CUI [1,1]
C0523207
UMLS CUI [1,2]
C0193388
Masson
Description

Masson

Data type

boolean

Alias
UMLS CUI [1,1]
C1294297
UMLS CUI [1,2]
C0193388
Toluidine blue or Giemsa
Description

Toluidine blue or Giemsa

Data type

boolean

Alias
UMLS CUI [1,1]
C0523203
UMLS CUI [1,2]
C0193388
UMLS CUI [2,1]
C0017542
UMLS CUI [2,2]
C0193388
Prussian blue
Description

Prussian blue

Data type

boolean

Alias
UMLS CUI [1,1]
C1294004
UMLS CUI [1,2]
C0193388
Periodic Acidic Schiff (PAS), with or without diastase
Description

Periodic Acidic Schiff with or without diastase

Data type

boolean

Alias
UMLS CUI [1,1]
C0440048
UMLS CUI [1,2]
C0193388
UMLS CUI [2,1]
C0440048
UMLS CUI [2,2]
C0193388
UMLS CUI [2,3]
C0002712
Oil red O
Description

Oil red O

Data type

boolean

Alias
UMLS CUI [1,1]
C1294000
UMLS CUI [1,2]
C0193388
Congo red
Description

Congo red

Data type

boolean

Alias
UMLS CUI [1,1]
C0009742
UMLS CUI [1,2]
C0193388
Hall's stain
Description

Hall's stain

Data type

boolean

Alias
UMLS CUI [1,1]
C1720394
UMLS CUI [1,2]
C0193388
Gridley's stain
Description

Gridley's stain

Data type

boolean

Alias
UMLS CUI [1,1]
C1293978
UMLS CUI [1,2]
C0193388
Rhodanine (copper)
Description

Rhodanine

Data type

boolean

Alias
UMLS CUI [1,1]
C0035486
UMLS CUI [1,2]
C0009968
UMLS CUI [1,3]
C0487602
UMLS CUI [1,4]
C0193388
Rubeanic acid (copper)
Description

Rubeanic acid

Data type

boolean

Alias
UMLS CUI [1,1]
C0073680
UMLS CUI [1,2]
C0009968
UMLS CUI [1,3]
C0487602
UMLS CUI [1,4]
C0193388
Orcein, aldehyde fuchsin or Victoria blue
Description

Orcein, aldehyde fuchsin or Victoria blue

Data type

boolean

Alias
UMLS CUI [1,1]
C1294001
UMLS CUI [1,2]
C0193388
UMLS CUI [2,1]
C0491984
UMLS CUI [2,2]
C0193388
UMLS CUI [3,1]
C0078232
UMLS CUI [3,2]
C0487602
UMLS CUI [3,3]
C0193388
Electron microscopy
Description

Electron microscopy

Data type

boolean

Alias
UMLS CUI [1,1]
C0026019
UMLS CUI [1,2]
C0193388
Hepatitis A immunostains positive
Description

Hepatitis A immunostains positive

Data type

boolean

Alias
UMLS CUI [1,1]
C0560226
UMLS CUI [1,2]
C3687908
UMLS CUI [1,3]
C0193388
Hepatitis B core antigen or hepatitis B surface antibody immunostains positive
Description

Hepatitis B core antigen or hepatitis B surface antibody immunostains positive

Data type

boolean

Alias
UMLS CUI [1,1]
C0019166
UMLS CUI [1,2]
C3687908
UMLS CUI [1,3]
C0193388
UMLS CUI [2,1]
C0369334
UMLS CUI [2,2]
C3687908
UMLS CUI [2,3]
C0193388
Hepatitis D immunostains
Description

Hepatitis D immunostains

Data type

boolean

Alias
UMLS CUI [1,1]
C0011226
UMLS CUI [1,2]
C3687908
UMLS CUI [1,3]
C0193388
Other immunostains
Description

Other immunostains

Data type

boolean

Alias
UMLS CUI [1,1]
C3687908
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0193388
Other Histologic Staining or Additional Studies Obtained
Description

please specify

Data type

boolean

Alias
UMLS CUI [1,1]
C0487602
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0193388
UMLS CUI [2,1]
C0205394
UMLS CUI [2,2]
C1524062
UMLS CUI [2,3]
C0430022
UMLS CUI [2,4]
C0193388
Other Histologic Staining or Additional Studies Obtained specification
Description

if applicable

Data type

text

Alias
UMLS CUI [1,1]
C0487602
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0193388
UMLS CUI [1,4]
C2348235
UMLS CUI [2,1]
C0205394
UMLS CUI [2,2]
C2348235
UMLS CUI [2,3]
C1524062
UMLS CUI [2,4]
C0430022
UMLS CUI [2,5]
C0193388

Similar models

Liver Events - Biopsy

  1. StudyEvent: ODM
    1. Liver Events - Biopsy
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Administrative Data
C1320722 (UMLS CUI-1)
Subject Number
Item
Subject Number
integer
C2348585 (UMLS CUI [1])
Date/Time of Assessment
Item
Date/Time of Assessment
datetime
C2985720 (UMLS CUI [1,1])
C1264639 (UMLS CUI [1,2])
Item Group
Liver Biopsy
C0193388 (UMLS CUI-1)
Date of liver biopsy
Item
Date of liver biopsy
date
C0193388 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
size of liver biopsy
Item
Approximate size of liver biopsy
integer
C1299482 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Biopsy size unit
Item
Biopsy size unit [hidden]
text
C1299482 (UMLS CUI [1,1])
C1519795 (UMLS CUI [1,2])
C0193388 (UMLS CUI [1,3])
Item Group
Final Diagnosis
C1546485 (UMLS CUI-1)
C0193388 (UMLS CUI-2)
Item
Final Diagnosis
text
C1546485 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Code List
Final Diagnosis
CL Item
Normal (A0)
CL Item
Check all that apply (AAA)
Acute hepatitis
Item
Acute hepatitis
boolean
C0267797 (UMLS CUI [1])
Chronic hepatitis
Item
Chronic hepatitis
boolean
C0019189 (UMLS CUI [1])
Cholestatic hepatitis
Item
Cholestatic hepatitis
boolean
C0149904 (UMLS CUI [1])
Drug-induced cholestasis
Item
Drug-induced cholestasis
boolean
C2062350 (UMLS CUI [1])
Acute viral hepatitis
Item
Acute viral hepatitis
boolean
C0276622 (UMLS CUI [1])
Chronic viral hepatitis
Item
Chronic viral hepatitis
boolean
C0276623 (UMLS CUI [1])
Drug-induced hepatitis
Item
Drug-induced hepatitis
boolean
C1262760 (UMLS CUI [1])
Autoimmune hepatitis
Item
Autoimmune hepatitis
boolean
C0241910 (UMLS CUI [1])
Liver Bridging necrosis
Item
Bridging necrosis
boolean
C0333511 (UMLS CUI [1,1])
C0023884 (UMLS CUI [1,2])
Submassive hepatic necrosis
Item
Submassive hepatic necrosis
boolean
C0151798 (UMLS CUI [1])
Massive hepatic necrosis
Item
Massive hepatic necrosis
boolean
C0001364 (UMLS CUI [1])
Steatosis - microvesicular
Item
Steatosis - microvesicular
boolean
C1850415 (UMLS CUI [1])
Steatosis - macrovesicular
Item
Steatosis - macrovesicular
boolean
C1837256 (UMLS CUI [1])
Steatosis - mixed
Item
Steatosis - mixed
boolean
C0015695 (UMLS CUI [1,1])
C0205430 (UMLS CUI [1,2])
Non-alcoholic steatohepatitis
Item
Non-alcoholic steatohepatitis
boolean
C3241937 (UMLS CUI [1])
Alcoholic hepatitis
Item
Alcoholic hepatitis
boolean
C0019187 (UMLS CUI [1])
Hepatic granulomas
Item
Hepatic granulomas
boolean
C0745754 (UMLS CUI [1])
Liver Sarcoidosis
Item
Sarcoidosis
boolean
C0744822 (UMLS CUI [1])
Liver Fibrosis
Item
Fibrosis
boolean
C0239946 (UMLS CUI [1])
Cirrhosis
Item
Cirrhosis
boolean
C0023890 (UMLS CUI [1])
Primary biliary cirrhosis
Item
Primary biliary cirrhosis
boolean
C0008312 (UMLS CUI [1])
Primary sclerosing cholangitis
Item
Primary sclerosing cholangitis
boolean
C0008311 (UMLS CUI [1])
Autoimmune overlap syndrome
Item
Autoimmune overlap syndrome
boolean
C2702837 (UMLS CUI [1])
Hemochromatosis
Item
Hemochromatosis
boolean
C0018995 (UMLS CUI [1])
Alpha-1-antitrypsin deficiency
Item
Alpha-1-antitrypsin deficiency
boolean
C0221757 (UMLS CUI [1])
Wilson's disease
Item
Wilson's disease
boolean
C0019202 (UMLS CUI [1])
Liver: Veno-occlusive disease
Item
Veno-occlusive disease
boolean
C0019156 (UMLS CUI [1])
Budd-Chiari syndrome
Item
Budd-Chiari syndrome
boolean
C0856761 (UMLS CUI [1])
Liver Neoplasia
Item
Neoplasia
boolean
C1882062 (UMLS CUI [1,1])
C0023884 (UMLS CUI [1,2])
Other Final Diagnosis
Item
Other Final Diagnosis
boolean
C1546485 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
Other Final Diagnosis specification
Item
Other Final Diagnosis specification
text
C1546485 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C2348235 (UMLS CUI [1,3])
Item Group
Liver Architecture
C0023884 (UMLS CUI-1)
C0935919 (UMLS CUI-2)
C0193388 (UMLS CUI-3)
Liver Architecture normal
Item
Liver Architecture normal?
boolean
C0023884 (UMLS CUI [1,1])
C0935919 (UMLS CUI [1,2])
C0205307 (UMLS CUI [1,3])
Bridging fibrosis
Item
Bridging fibrosis
boolean
C0334160 (UMLS CUI [1])
Diffuse fibrosis
Item
Diffuse fibrosis
boolean
C0016059 (UMLS CUI [1,1])
C0205219 (UMLS CUI [1,2])
Nodular regenerative hyperplasia
Item
Nodular regenerative hyperplasia
boolean
C4048264 (UMLS CUI [1])
Congenital hepatic fibrosis
Item
Congenital hepatic fibrosis
boolean
C0009714 (UMLS CUI [1])
Cirrhosis
Item
Cirrhosis
boolean
C0023890 (UMLS CUI [1])
Centrilobular congestion
Item
Centrilobular congestion
boolean
C0519014 (UMLS CUI [1])
Endophlebitis
Item
Endophlebitis
boolean
C0014234 (UMLS CUI [1])
Veno-occlusive disease
Item
Veno-occlusive disease
boolean
C0948441 (UMLS CUI [1])
Canalicular cholestasis
Item
Canalicular cholestasis
boolean
C3150342 (UMLS CUI [1])
Apoptosis
Item
Apoptosis
boolean
C0162638 (UMLS CUI [1])
Focal hepatocellular necrosis
Item
Focal (or spotty or mild ) hepatocellular necrosis
boolean
C1855038 (UMLS CUI [1,1])
C0205234 (UMLS CUI [1,2])
lnterface hepatitis
Item
lnterface hepatitis (periportal hepatitis or piecemealnecrosis)
boolean
C5139205 (UMLS CUI [1])
lschaemic necrosis
Item
lschaemic necrosis
boolean
C0027540 (UMLS CUI [1,1])
C0475224 (UMLS CUI [1,2])
Centrolobular necrosis
Item
Centrolobular (Zone 3) necrosis
boolean
C0027540 (UMLS CUI [1,1])
C0682619 (UMLS CUI [1,2])
Focal coagulative necrosis
Item
Focal coagulative necrosis
boolean
C1522058 (UMLS CUI [1,1])
C0205234 (UMLS CUI [1,2])
Centrolobular coagulative necrosis
Item
Centrolobular (Zone 3) coagulative necrosis
boolean
C1522058 (UMLS CUI [1,1])
C0682619 (UMLS CUI [1,2])
Bridging hepatocellular necrosis
Item
Bridging hepatocellular necrosis
boolean
C1855038 (UMLS CUI [1,1])
C0333511 (UMLS CUI [1,2])
Massive or panlobular hepatocellular necrosis
Item
Massive or panlobular hepatocellular necrosis
boolean
C1855038 (UMLS CUI [1,1])
C0522501 (UMLS CUI [1,2])
C1855038 (UMLS CUI [2,1])
C0442131 (UMLS CUI [2,2])
Dysplasia liver
Item
Dysplasia liver
boolean
C0334044 (UMLS CUI [1,1])
C0023884 (UMLS CUI [1,2])
Neoplasia liver
Item
Neoplasia liver
boolean
C1882062 (UMLS CUI [1,1])
C0023884 (UMLS CUI [1,2])
Other Liver Architecture
Item
Other Liver Architecture
boolean
C0023884 (UMLS CUI [1,1])
C0935919 (UMLS CUI [1,2])
C0205394 (UMLS CUI [1,3])
Specify Other Liver Architecture
Item
Specify Other Liver Architecture
text
C0023884 (UMLS CUI [1,1])
C0935919 (UMLS CUI [1,2])
C0205394 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
Item Group
Description of Liver Cells or Hepatocytes
C0227525 (UMLS CUI-1)
C0678257 (UMLS CUI-2)
Normal Hepatocytes
Item
Normal Liver Cells or Hepatocytes
boolean
C0227525 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Ballooning Hepatocytes
Item
Ballooning
boolean
C0333445 (UMLS CUI [1,1])
C0227525 (UMLS CUI [1,2])
Acidophilic Hepatocytes
Item
Acidophilic
boolean
C0227525 (UMLS CUI [1,1])
C0333931 (UMLS CUI [1,2])
Pseudoxanthomatous Hepatocytes
Item
Pseudoxanthomatous
boolean
C0227525 (UMLS CUI [1,1])
C2348205 (UMLS CUI [1,2])
C1710694 (UMLS CUI [1,3])
Multinucleated giant hepatocytes
Item
Multinucleated giant hepatocytes
boolean
C1850414 (UMLS CUI [1,1])
C0227525 (UMLS CUI [1,2])
Other Hepatocyte Description
Item
Other Hepatocyte Description
boolean
C0227525 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
Other Hepatocytes specification
Item
Other Hepatocytes specification
text
C1521902 (UMLS CUI [1,1])
C0227525 (UMLS CUI [1,2])
C0205394 (UMLS CUI [1,3])
Item Group
Liver Cell or Hepatocyte Inclusions or Vacuoles
C0227525 (UMLS CUI-1)
C0042219 (UMLS CUI-2)
C0227525 (UMLS CUI-3)
C0007637 (UMLS CUI-4)
Hepatocyte Inclusions or Vacuoles
Item
Liver Cell or Hepatocyte Inclusions or Vacuoles?
boolean
C0227525 (UMLS CUI [1,1])
C0042219 (UMLS CUI [1,2])
C0227525 (UMLS CUI [2,1])
C0007637 (UMLS CUI [2,2])
Macrovesicular steatosis
Item
Macrovesicular steatosis
boolean
C1837256 (UMLS CUI [1])
Microvesicular steatosis
Item
Microvesicular steatosis
boolean
C1850415 (UMLS CUI [1])
Bile accumulation
Item
Bile accumulation
boolean
C3686784 (UMLS CUI [1])
Diastase-resistant, PAS-positive cytoplasmic inclusions
Item
Diastase-resistant, PAS-positive cytoplasmic inclusions
boolean
C1856311 (UMLS CUI [1])
Alpha-1-antitrypsin inclusions
Item
Alpha-1-antitrypsin inclusions
boolean
C0002191 (UMLS CUI [1,1])
C0007637 (UMLS CUI [1,2])
Megamitochondria
Item
Megamitochondria
boolean
C0549177 (UMLS CUI [1,1])
C0026237 (UMLS CUI [1,2])
Mallory bodies
Item
Mallory bodies
boolean
C0333744 (UMLS CUI [1])
Ground Glass inclusions
Item
Ground Glass inclusions
boolean
C4697773 (UMLS CUI [1,1])
C0007637 (UMLS CUI [1,2])
Lipofuscin pigment
Item
Lipofuscin pigment
boolean
C0023789 (UMLS CUI [1])
Hemosiderin granules
Item
Hemosiderin granules
boolean
C0019113 (UMLS CUI [1,1])
C3853628 (UMLS CUI [1,2])
Orcein positive cytoplasmin granules
Item
Orcein positive cytoplasmin granules
boolean
C0069596 (UMLS CUI [1,1])
C3853628 (UMLS CUI [1,2])
Protoporphyrin crystals
Item
Protoporphyrin crystals (birefringent under polarised light)
boolean
C0033733 (UMLS CUI [1,1])
C0444626 (UMLS CUI [1,2])
Uroporphyrin crystals
Item
Uroporphyrin crystals (red fluorescence under ultraviolet light)
boolean
C0042093 (UMLS CUI [1,1])
C0444626 (UMLS CUI [1,2])
Other Hepatocyte Inclusions or Vacuoles
Item
Other Hepatocyte Inclusions or Vacuoles
boolean
C0205394 (UMLS CUI [1,1])
C0227525 (UMLS CUI [1,2])
C0042219 (UMLS CUI [1,3])
C0205394 (UMLS CUI [2,1])
C0227525 (UMLS CUI [2,2])
C0007637 (UMLS CUI [2,3])
Other Hepatocyte Inclusions or Vacuoles Specification
Item
Other Hepatocyte Inclusions or Vacuoles Specification
text
C0205394 (UMLS CUI [1,1])
C0227525 (UMLS CUI [1,2])
C0042219 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
C0205394 (UMLS CUI [2,1])
C0227525 (UMLS CUI [2,2])
C0007637 (UMLS CUI [2,3])
C2348235 (UMLS CUI [2,4])
Item Group
Hepatocyte or Liver Cell Nuclear Abnormalities
C0227525 (UMLS CUI-1)
C1849376 (UMLS CUI-2)
Hepatocyte Nuclear Abnormalities
Item
Hepatocyte or Liver Cell Nuclear Abnormalities
boolean
C0227525 (UMLS CUI [1,1])
C1849376 (UMLS CUI [1,2])
Hepatocellular mitosis
Item
Hepatocellular mitosis
boolean
C0026255 (UMLS CUI [1,1])
C2697585 (UMLS CUI [1,2])
Binucleated or multinucleated hepatocytes
Item
Binucleated or multinucleated hepatocytes
boolean
C0333909 (UMLS CUI [1,1])
C0227525 (UMLS CUI [1,2])
C4054455 (UMLS CUI [2])
CMV inclusion bodies
Item
CMV inclusion bodies
boolean
C0010825 (UMLS CUI [1,1])
C0007637 (UMLS CUI [1,2])
HSV inclusions
Item
HSV inclusions
boolean
C0319232 (UMLS CUI [1,1])
C0007637 (UMLS CUI [1,2])
Varicella inclusions
Item
Varicella inclusions
boolean
C0740380 (UMLS CUI [1,1])
C0007637 (UMLS CUI [1,2])
Other Hepatocyte Nuclear Abnormalities
Item
Other Hepatocyte Nuclear Abnormalities
boolean
C0205394 (UMLS CUI [1,1])
C0227525 (UMLS CUI [1,2])
C1849376 (UMLS CUI [1,3])
Other Hepatocyte Nuclear Abnormalities Specification
Item
Other Hepatocyte Nuclear Abnormalities Specification
text
C0205394 (UMLS CUI [1,1])
C0227525 (UMLS CUI [1,2])
C1849376 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
Item Group
Liver or Lobular Infiltrates
C0205417 (UMLS CUI-1)
C1400896 (UMLS CUI-2)
C1400896 (UMLS CUI-3)
Liver or Lobular Infiltrates
Item
Liver or Lobular Infiltrates
boolean
C0205417 (UMLS CUI [1,1])
C1400896 (UMLS CUI [1,2])
C1400896 (UMLS CUI [2])
Liver or Lobular Infiltrates Eosinophils
Item
Eosinophils
boolean
C0205417 (UMLS CUI [1,1])
C1400896 (UMLS CUI [1,2])
C0014467 (UMLS CUI [1,3])
C1400896 (UMLS CUI [2,1])
C0014467 (UMLS CUI [2,2])
Liver or Lobular Infiltrates Lymphocytes
Item
Lymphocytes
boolean
C0205417 (UMLS CUI [1,1])
C1400896 (UMLS CUI [1,2])
C0024264 (UMLS CUI [1,3])
C1400896 (UMLS CUI [2,1])
C0024264 (UMLS CUI [2,2])
Liver or Lobular Infiltrates Plasma cells
Item
Plasma cells
boolean
C0205417 (UMLS CUI [1,1])
C1400896 (UMLS CUI [1,2])
C0032112 (UMLS CUI [1,3])
C1400896 (UMLS CUI [2,1])
C0032112 (UMLS CUI [2,2])
Liver or Lobular Infiltrates Neutrophils
Item
Neutrophils
boolean
C0205417 (UMLS CUI [1,1])
C1400896 (UMLS CUI [1,2])
C0027950 (UMLS CUI [1,3])
C1400896 (UMLS CUI [2,1])
C0027950 (UMLS CUI [2,2])
Liver or Lobular Infiltrates Macrophages and proliferating Kupffer cells
Item
Macrophages and proliferating Kupffer cells
boolean
C0205417 (UMLS CUI [1,1])
C1400896 (UMLS CUI [1,2])
C0022801 (UMLS CUI [1,3])
C1400896 (UMLS CUI [2,1])
C0022801 (UMLS CUI [2,2])
C0205417 (UMLS CUI [3,1])
C1400896 (UMLS CUI [3,2])
C1168262 (UMLS CUI [3,3])
C1400896 (UMLS CUI [4,1])
C1168262 (UMLS CUI [4,2])
Liver or Lobular Infiltrates Granulomas
Item
Granulomas
boolean
C0745754 (UMLS CUI [1,1])
C0205417 (UMLS CUI [1,2])
C0745754 (UMLS CUI [2])
Other Liver or Lobular Infiltrates
Item
Other Liver or Lobular Infiltrates
boolean
C0205417 (UMLS CUI [1,1])
C1400896 (UMLS CUI [1,2])
C0205394 (UMLS CUI [1,3])
C1400896 (UMLS CUI [2,1])
C0205394 (UMLS CUI [2,2])
Other Liver or Lobular Infiltrates specification
Item
Other Liver or Lobular Infiltrates specification
text
C0205417 (UMLS CUI [1,1])
C1400896 (UMLS CUI [1,2])
C0205394 (UMLS CUI [1,3])
C1521902 (UMLS CUI [1,4])
C1400896 (UMLS CUI [2,1])
C0205394C1521902 (UMLS CUI [2,2])
Item Group
Portal Tract Inflammation
C3854488 (UMLS CUI-1)
C0193388 (UMLS CUI-2)
Portal Tract Inflammation
Item
Portal Tract Inflammation
boolean
C3854488 (UMLS CUI [1])
Eosinophils
Item
Eosinophils
boolean
C0014467 (UMLS CUI [1,1])
C3854488 (UMLS CUI [1,2])
Lymphoid aggregates and/or follicles
Item
Lymphoid aggregates and/or follicles
boolean
C0229653 (UMLS CUI [1,1])
C3854488 (UMLS CUI [1,2])
C3854488 (UMLS CUI [2,1])
C1518071 (UMLS CUI [2,2])
C1571705 (UMLS CUI [2,3])
Plasma cells
Item
Plasma cells
boolean
C0032112 (UMLS CUI [1,1])
C3854488 (UMLS CUI [1,2])
Neutrophils
Item
Neutrophils
boolean
C0027950 (UMLS CUI [1,1])
C3854488 (UMLS CUI [1,2])
Histocytes and macrophages
Item
Histocytes and macrophages
boolean
C0024432 (UMLS CUI [1,1])
C3854488 (UMLS CUI [1,2])
C3854488 (UMLS CUI [2,1])
C0019612 (UMLS CUI [2,2])
Other Portal Tract Inflammation
Item
Other Portal Tract Inflammation
boolean
C3854488 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
Other Portal Tract Inflammation specification
Item
Other Portal Tract Inflammation specification
text
C3854488 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C2348235 (UMLS CUI [1,3])
Item Group
Bile Ducts
C0005400 (UMLS CUI-1)
Bile Ducts normal
Item
Bile Ducts normal?
boolean
C0005400 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Proliferation of bile ducts
Item
Proliferation of bile ducts (bile ductular reaction)
boolean
C0005400 (UMLS CUI [1,1])
C0334094 (UMLS CUI [1,2])
Dilation, degeneration or disruption of portal bile ducts
Item
Dilation, degeneration or disruption of portal bile ducts
boolean
C0005400 (UMLS CUI [1,1])
C0011164 (UMLS CUI [1,2])
C1849767 (UMLS CUI [2])
C0005400 (UMLS CUI [3,1])
C0332453 (UMLS CUI [3,2])
Paucity of bile ducts
Item
Paucity of bile ducts
boolean
C4273160 (UMLS CUI [1])
Periductal fibrosis
Item
Periductal fibrosis
boolean
C0016059 (UMLS CUI [1,1])
C1282914 (UMLS CUI [1,2])
C0005400 (UMLS CUI [1,3])
Other Bile ducts abnormality
Item
Other Bile ducts abnormality
boolean
C0205394 (UMLS CUI [1,1])
C1704258 (UMLS CUI [1,2])
C0005400 (UMLS CUI [1,3])
Other Bile ducts abnormality specification
Item
Other Bile ducts abnormality specification
text
C0205394 (UMLS CUI [1,1])
C1704258 (UMLS CUI [1,2])
C0005400 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
Item Group
Portal Veins
C0032718 (UMLS CUI-1)
Portal Veins normal
Item
Portal Veins normal?
boolean
C0032718 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Pyelophlebitis
Item
Pyelophlebitis
boolean
C1405883 (UMLS CUI [1,1])
C0032718 (UMLS CUI [1,2])
Thrombosis, sclerosis or occlusion of portal vein
Item
Thrombosis, sclerosis or occlusion of portal vein
boolean
C0155773 (UMLS CUI [1])
C0400960 (UMLS CUI [2])
C0265029 (UMLS CUI [3])
Neoplastic invasion of portal vein
Item
Neoplastic invasion of portal vein
boolean
C1709160 (UMLS CUI [1,1])
C1510886 (UMLS CUI [1,2])
C0032718 (UMLS CUI [1,3])
Granulomatous compression of portal vein
Item
Granulomatous compression of portal vein
boolean
C0032718 (UMLS CUI [1,1])
C0439667 (UMLS CUI [1,2])
C0728907 (UMLS CUI [1,3])
Other Portal veins Abnormality
Item
Other Portal veins Abnormality
boolean
C0032718 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C1704258 (UMLS CUI [1,3])
Other Portal veins Abnormality specification
Item
Other Portal veins Abnormality specification
text
C0032718 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C1704258 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
Item Group
Liver Infections
C1112211 (UMLS CUI-1)
C0193388 (UMLS CUI-2)
Liver Infections
Item
Liver Infections
boolean
C1112211 (UMLS CUI [1])
Leishmaniasis donovani
Item
Leishmaniasis donovani
boolean
C0023281 (UMLS CUI [1])
Plasmodium falciparum
Item
Plasmodium falciparum
boolean
C0032150 (UMLS CUI [1])
Toxoplasmosis
Item
Toxoplasmosis
boolean
C0040558 (UMLS CUI [1])
Cryptococcus neoformans
Item
Cryptococcus neoformans
boolean
C0010416 (UMLS CUI [1])
Histoplasma capsulatum
Item
Histoplasma capsulatum
boolean
C0319941 (UMLS CUI [1])
Mycobacterium tuberculois
Item
Mycobacterium tuberculois
boolean
C0026926 (UMLS CUI [1])
Other mycobacterial species
Item
Other mycobacterial species
boolean
C1265234 (UMLS CUI [1])
Other Liver Infection
Item
Other Liver Infection
boolean
C0205394 (UMLS CUI [1,1])
C1112211 (UMLS CUI [1,2])
Other Liver Infection specification
Item
Other Liver Infection specification
text
C0205394 (UMLS CUI [1,1])
C1112211 (UMLS CUI [1,2])
C2348235 (UMLS CUI [1,3])
Item Group
K. Parasites or Ova
C0030498 (UMLS CUI-1)
C1267673 (UMLS CUI-2)
C0193388 (UMLS CUI-3)
Parasites or Ova
Item
Parasites or Ova?
boolean
C0030498 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
C1267673 (UMLS CUI [2,1])
C0193388 (UMLS CUI [2,2])
Schistosome and/or ova
Item
Schistosome and/or ova
boolean
C0036315 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
C4303012 (UMLS CUI [2,1])
C0193388 (UMLS CUI [2,2])
Ascaris and/or ova
Item
Ascaris and/or ova
boolean
C3698183 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
C0003954 (UMLS CUI [2,1])
C0193388 (UMLS CUI [2,2])
Toxocara and/or ova
Item
Toxocara and/or ova
boolean
C0040550 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
C0040550 (UMLS CUI [2,1])
C1267673 (UMLS CUI [2,2])
C0193388 (UMLS CUI [2,3])
Echinococcus cysts
Item
Echinococcus cysts
boolean
C0013502 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Hepatic capillariasis worms and/or ova
Item
Hepatic capillariasis worms and/or ova
boolean
C0277202 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
C0006896 (UMLS CUI [2,1])
C1267673 (UMLS CUI [2,2])
C0193388 (UMLS CUI [2,3])
Other Parasites or Ova
Item
Other Parasites or Ova
boolean
C1267673 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0193388 (UMLS CUI [1,3])
C0030498 (UMLS CUI [2,1])
C0205394 (UMLS CUI [2,2])
C0193388 (UMLS CUI [2,3])
Other Parasites or Ova specification
Item
Other Parasites or Ova specification
text
C1267673 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0193388 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
C0030498 (UMLS CUI [2,1])
C0205394 (UMLS CUI [2,2])
C0193388 (UMLS CUI [2,3])
C2348235 (UMLS CUI [2,4])
Item Group
Histologic Staining or Additional Studies Obtained
C0487602 (UMLS CUI-1)
C0193388 (UMLS CUI-2)
C1524062 (UMLS CUI-3)
C0430022 (UMLS CUI-4)
C0193388 (UMLS CUI-5)
Haematoxylin and eosin
Item
Haematoxylin and eosin (or H & E)
boolean
C0523207 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Masson
Item
Masson
boolean
C1294297 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Toluidine blue or Giemsa
Item
Toluidine blue or Giemsa
boolean
C0523203 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
C0017542 (UMLS CUI [2,1])
C0193388 (UMLS CUI [2,2])
Prussian blue
Item
Prussian blue
boolean
C1294004 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Periodic Acidic Schiff with or without diastase
Item
Periodic Acidic Schiff (PAS), with or without diastase
boolean
C0440048 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
C0440048 (UMLS CUI [2,1])
C0193388 (UMLS CUI [2,2])
C0002712 (UMLS CUI [2,3])
Oil red O
Item
Oil red O
boolean
C1294000 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Congo red
Item
Congo red
boolean
C0009742 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Hall's stain
Item
Hall's stain
boolean
C1720394 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Gridley's stain
Item
Gridley's stain
boolean
C1293978 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Rhodanine
Item
Rhodanine (copper)
boolean
C0035486 (UMLS CUI [1,1])
C0009968 (UMLS CUI [1,2])
C0487602 (UMLS CUI [1,3])
C0193388 (UMLS CUI [1,4])
Rubeanic acid
Item
Rubeanic acid (copper)
boolean
C0073680 (UMLS CUI [1,1])
C0009968 (UMLS CUI [1,2])
C0487602 (UMLS CUI [1,3])
C0193388 (UMLS CUI [1,4])
Orcein, aldehyde fuchsin or Victoria blue
Item
Orcein, aldehyde fuchsin or Victoria blue
boolean
C1294001 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
C0491984 (UMLS CUI [2,1])
C0193388 (UMLS CUI [2,2])
C0078232 (UMLS CUI [3,1])
C0487602 (UMLS CUI [3,2])
C0193388 (UMLS CUI [3,3])
Electron microscopy
Item
Electron microscopy
boolean
C0026019 (UMLS CUI [1,1])
C0193388 (UMLS CUI [1,2])
Hepatitis A immunostains positive
Item
Hepatitis A immunostains positive
boolean
C0560226 (UMLS CUI [1,1])
C3687908 (UMLS CUI [1,2])
C0193388 (UMLS CUI [1,3])
Hepatitis B core antigen or hepatitis B surface antibody immunostains positive
Item
Hepatitis B core antigen or hepatitis B surface antibody immunostains positive
boolean
C0019166 (UMLS CUI [1,1])
C3687908 (UMLS CUI [1,2])
C0193388 (UMLS CUI [1,3])
C0369334 (UMLS CUI [2,1])
C3687908 (UMLS CUI [2,2])
C0193388 (UMLS CUI [2,3])
Hepatitis D immunostains
Item
Hepatitis D immunostains
boolean
C0011226 (UMLS CUI [1,1])
C3687908 (UMLS CUI [1,2])
C0193388 (UMLS CUI [1,3])
Other immunostains
Item
Other immunostains
boolean
C3687908 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0193388 (UMLS CUI [1,3])
Other Histologic Staining or Additional Studies Obtained
Item
Other Histologic Staining or Additional Studies Obtained
boolean
C0487602 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0193388 (UMLS CUI [1,3])
C0205394 (UMLS CUI [2,1])
C1524062 (UMLS CUI [2,2])
C0430022 (UMLS CUI [2,3])
C0193388 (UMLS CUI [2,4])
Other Histologic Staining or Additional Studies Obtained specification
Item
Other Histologic Staining or Additional Studies Obtained specification
text
C0487602 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0193388 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
C0205394 (UMLS CUI [2,1])
C2348235 (UMLS CUI [2,2])
C1524062 (UMLS CUI [2,3])
C0430022 (UMLS CUI [2,4])
C0193388 (UMLS CUI [2,5])