Solid organ transplant sub-cohort

Type of functioning organ transplant
Description

Type of functioning organ transplant

Alias
UMLS CUI-1
C0029216
UMLS CUI-2
C0332307
UMLS CUI-3
C0205245
Heart
Description

Functional Heart transplant

Data type

boolean

Alias
UMLS CUI [1,1]
C0018787
UMLS CUI [1,2]
C0029216
UMLS CUI [1,3]
C0205245
Liver
Description

Functional Liver transplant

Data type

boolean

Alias
UMLS CUI [1,1]
C0023884
UMLS CUI [1,2]
C0029216
UMLS CUI [1,3]
C0205245
Lung
Description

Functional Lung transplant

Data type

boolean

Alias
UMLS CUI [1,1]
C0024109
UMLS CUI [1,2]
C0029216
UMLS CUI [1,3]
C0205245
Kidney
Description

Functional kidney transplant

Data type

boolean

Alias
UMLS CUI [1,1]
C0022646
UMLS CUI [1,2]
C0029216
UMLS CUI [1,3]
C0205245
Pancreas
Description

Functional pancreas transplant

Data type

boolean

Alias
UMLS CUI [1,1]
C0030274
UMLS CUI [1,2]
C0029216
UMLS CUI [1,3]
C0205245
Small bowel
Description

Functional small bowel transplant

Data type

boolean

Alias
UMLS CUI [1,1]
C0021852
UMLS CUI [1,2]
C0029216
UMLS CUI [1,3]
C0205245
Unknown
Description

Functional transplant unknown

Data type

boolean

Alias
UMLS CUI [1,1]
C0439673
UMLS CUI [1,2]
C0029216
UMLS CUI [1,3]
C0205245
Most recent transplantation
Description

Most recent transplantation

Alias
UMLS CUI-1
C1513491
UMLS CUI-2
C0029216
Time since most recent transplantation
Description

Most recent transplantation

Data type

integer

Alias
UMLS CUI [1,1]
C1272706
UMLS CUI [1,2]
C1513491
UMLS CUI [1,3]
C0029216
Immunsuppression at diagnosis of SARS-CoV-2
Description

Immunsuppression at diagnosis of SARS-CoV-2

Alias
UMLS CUI-1
C5203676
UMLS CUI-2
C0021079
UMLS CUI-3
C0011900
Azathioprine
Description

Indicate immunosuppressive medication at diagnosis of SARS-CoV-2.

Data type

integer

Alias
UMLS CUI [1]
C0004482
Belatacept
Description

Indicate immunosuppressive medication at diagnosis of SARS-CoV-2.

Data type

integer

Alias
UMLS CUI [1]
C1619962
Corticosteroids
Description

Indicate immunosuppressive medication at diagnosis of SARS-CoV-2.

Data type

integer

Alias
UMLS CUI [1]
C0001617
Cyclosporine
Description

Indicate immunosuppressive medication at diagnosis of SARS-CoV-2.

Data type

integer

Alias
UMLS CUI [1]
C0010592
mTOR-Inhibitor
Description

Indicate immunosuppressive medication at diagnosis of SARS-CoV-2.

Data type

integer

Alias
UMLS CUI [1]
C2746052
Mycophenolic acid/mycofenolate mofetil
Description

Indicate immunosuppressive medication at diagnosis of SARS-CoV-2.

Data type

integer

Alias
UMLS CUI [1]
C0026933
UMLS CUI [2]
C0209368
Tacrolimus
Description

Indicate immunosuppressive medication at diagnosis of SARS-CoV-2.

Data type

integer

Alias
UMLS CUI [1]
C0085149
Other
Description

Indicate other immunosuppressive medication at diagnosis of SARS-CoV-2.

Data type

integer

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C0021079
Graft status before COVID-19
Description

Graft status before COVID-19

Alias
UMLS CUI-1
C0478647
UMLS CUI-2
C0332152
UMLS CUI-3
C5203676
Stable graft function over >3 months
Description

Indicate graft status before diagnosis of SARS-CoV-2.

Data type

boolean

Alias
UMLS CUI [1,1]
C0478647
UMLS CUI [1,2]
C0205360
UMLS CUI [1,3]
C0449238
Known chronic rejection
Description

Indicate graft status before diagnosis of SARS-CoV-2.

Data type

boolean

Alias
UMLS CUI [1,1]
C0877542
UMLS CUI [1,2]
C0205191
UMLS CUI [1,3]
C0205309
T-cell depleting therapy within last 6 months
Description

Indicate T-cell depleting therapy within last 6 month before diagnosis of SARS-CoV-2.

Data type

boolean

Alias
UMLS CUI [1,1]
C0677960
UMLS CUI [1,2]
C0332185
B-cell depleting therapy within last 6 months
Description

Indicate B-cell depleting therapy within last 6 month before diagnosis of SARS-CoV-2.

Data type

boolean

Alias
UMLS CUI [1,1]
C1171324
UMLS CUI [1,2]
C0332185
Steroid bolus therapy within last 6 months
Description

Recent steroid bolus therapy

Data type

boolean

Alias
UMLS CUI [1,1]
C0149783
UMLS CUI [1,2]
C1705509
UMLS CUI [1,3]
C0332185
Unknown
Description

Graft status unknown

Data type

boolean

Alias
UMLS CUI [1,1]
C0439673
UMLS CUI [1,2]
C0478647
Therapeutic measures of transplant specific therapy
Description

Therapeutic measures of transplant specific therapy

Alias
UMLS CUI-1
C0087111
UMLS CUI-2
C0079809
UMLS CUI-3
C0029216
Azathioprine dose
Description

Indicate therapeutic measures of transplant specific therapy during SARS-CoV-2 infection.

Data type

integer

Alias
UMLS CUI [1,1]
C0004482
UMLS CUI [1,2]
C3174092
Belatacept dose
Description

Indicate therapeutic measures of transplant specific therapy during SARS-CoV-2 infection.

Data type

integer

Alias
UMLS CUI [1,1]
C3174092
UMLS CUI [1,2]
C1619962
Corticosteroid dose
Description

Indicate therapeutic measures of transplant specific therapy during SARS-CoV-2 infection.

Data type

integer

Alias
UMLS CUI [1,1]
C0001617
UMLS CUI [1,2]
C3174092
Cyclosporine dose
Description

Indicate therapeutic measures of transplant specific therapy during SARS-CoV-2 infection.

Data type

integer

Alias
UMLS CUI [1,1]
C0010592
UMLS CUI [1,2]
C3174092
mTOR-Inhibitor dose
Description

Indicate therapeutic measures of transplant specific therapy during SARS-CoV-2 infection.

Data type

integer

Alias
UMLS CUI [1,1]
C2746052
UMLS CUI [1,2]
C3174092
Mycophenolic acid/mycofenolate mofetil dose
Description

Indicate therapeutic measures of transplant specific therapy during SARS-CoV-2 infection.

Data type

integer

Alias
UMLS CUI [1,1]
C0026933
UMLS CUI [1,2]
C3174092
UMLS CUI [2,1]
C0209368
UMLS CUI [2,2]
C3174092
Tacrolimus dose
Description

Indicate therapeutic measures of transplant specific therapy during SARS-CoV-2 infection.

Data type

integer

Alias
UMLS CUI [1,1]
C0085149
UMLS CUI [1,2]
C3174092
Other
Description

Indicate other therapeutic measures of transplant specific therapy during SARS-CoV-2 infection.

Data type

integer

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C0087111
UMLS CUI [1,3]
C0029216
Is data entry for this section finished?
Description

Is data entry for this section finished?

Alias
UMLS CUI-1
C4684556
UMLS CUI-2
C1828479
UMLS CUI-3
C0205197
Is data entry for this section finished?
Description

Is data entry for this section finished?

Data type

integer

Alias
UMLS CUI [1,1]
C4684556
UMLS CUI [1,2]
C1828479
UMLS CUI [1,3]
C0205197

Similar models

Solid organ transplant sub-cohort

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Type of functioning organ transplant
C0029216 (UMLS CUI-1)
C0332307 (UMLS CUI-2)
C0205245 (UMLS CUI-3)
Functional Heart transplant
Item
Heart
boolean
C0018787 (UMLS CUI [1,1])
C0029216 (UMLS CUI [1,2])
C0205245 (UMLS CUI [1,3])
Functional Liver transplant
Item
Liver
boolean
C0023884 (UMLS CUI [1,1])
C0029216 (UMLS CUI [1,2])
C0205245 (UMLS CUI [1,3])
Functional Lung transplant
Item
Lung
boolean
C0024109 (UMLS CUI [1,1])
C0029216 (UMLS CUI [1,2])
C0205245 (UMLS CUI [1,3])
Functional kidney transplant
Item
Kidney
boolean
C0022646 (UMLS CUI [1,1])
C0029216 (UMLS CUI [1,2])
C0205245 (UMLS CUI [1,3])
Functional pancreas transplant
Item
Pancreas
boolean
C0030274 (UMLS CUI [1,1])
C0029216 (UMLS CUI [1,2])
C0205245 (UMLS CUI [1,3])
Functional small bowel transplant
Item
Small bowel
boolean
C0021852 (UMLS CUI [1,1])
C0029216 (UMLS CUI [1,2])
C0205245 (UMLS CUI [1,3])
Functional transplant unknown
Item
Unknown
boolean
C0439673 (UMLS CUI [1,1])
C0029216 (UMLS CUI [1,2])
C0205245 (UMLS CUI [1,3])
Item Group
Most recent transplantation
C1513491 (UMLS CUI-1)
C0029216 (UMLS CUI-2)
Item
Time since most recent transplantation
integer
C1272706 (UMLS CUI [1,1])
C1513491 (UMLS CUI [1,2])
C0029216 (UMLS CUI [1,3])
Code List
Time since most recent transplantation
CL Item
<3 months (1)
CL Item
3 - 12 months (2)
CL Item
> 12 months (3)
CL Item
Unknown (4)
Item Group
Immunsuppression at diagnosis of SARS-CoV-2
C5203676 (UMLS CUI-1)
C0021079 (UMLS CUI-2)
C0011900 (UMLS CUI-3)
Item
Azathioprine
integer
C0004482 (UMLS CUI [1])
Code List
Azathioprine
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Belatacept
integer
C1619962 (UMLS CUI [1])
Code List
Belatacept
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Corticosteroids
integer
C0001617 (UMLS CUI [1])
Code List
Corticosteroids
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Cyclosporine
integer
C0010592 (UMLS CUI [1])
Code List
Cyclosporine
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
mTOR-Inhibitor
integer
C2746052 (UMLS CUI [1])
Code List
mTOR-Inhibitor
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Mycophenolic acid/mycofenolate mofetil
integer
C0026933 (UMLS CUI [1])
C0209368 (UMLS CUI [2])
Code List
Mycophenolic acid/mycofenolate mofetil
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Tacrolimus
integer
C0085149 (UMLS CUI [1])
Code List
Tacrolimus
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Other
integer
C0205394 (UMLS CUI [1,1])
C0021079 (UMLS CUI [1,2])
Code List
Other
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item Group
Graft status before COVID-19
C0478647 (UMLS CUI-1)
C0332152 (UMLS CUI-2)
C5203676 (UMLS CUI-3)
Stable graft function over 3 months
Item
Stable graft function over >3 months
boolean
C0478647 (UMLS CUI [1,1])
C0205360 (UMLS CUI [1,2])
C0449238 (UMLS CUI [1,3])
Known chronic rejection
Item
Known chronic rejection
boolean
C0877542 (UMLS CUI [1,1])
C0205191 (UMLS CUI [1,2])
C0205309 (UMLS CUI [1,3])
Recent T-cell depletion
Item
T-cell depleting therapy within last 6 months
boolean
C0677960 (UMLS CUI [1,1])
C0332185 (UMLS CUI [1,2])
Recent B-cell depletion
Item
B-cell depleting therapy within last 6 months
boolean
C1171324 (UMLS CUI [1,1])
C0332185 (UMLS CUI [1,2])
Recent steroid bolus therapy
Item
Steroid bolus therapy within last 6 months
boolean
C0149783 (UMLS CUI [1,1])
C1705509 (UMLS CUI [1,2])
C0332185 (UMLS CUI [1,3])
Graft status unknown
Item
Unknown
boolean
C0439673 (UMLS CUI [1,1])
C0478647 (UMLS CUI [1,2])
Item Group
Therapeutic measures of transplant specific therapy
C0087111 (UMLS CUI-1)
C0079809 (UMLS CUI-2)
C0029216 (UMLS CUI-3)
Item
Azathioprine dose
integer
C0004482 (UMLS CUI [1,1])
C3174092 (UMLS CUI [1,2])
Code List
Azathioprine dose
CL Item
Unchanged (1)
CL Item
>= 50% reduction (2)
CL Item
Stopp (3)
CL Item
Unknown (4)
Item
Belatacept dose
integer
C3174092 (UMLS CUI [1,1])
C1619962 (UMLS CUI [1,2])
Code List
Belatacept dose
CL Item
Unchanged (1)
CL Item
>= 50% reduction (2)
CL Item
Stopp (3)
CL Item
Unknown (4)
Item
Corticosteroid dose
integer
C0001617 (UMLS CUI [1,1])
C3174092 (UMLS CUI [1,2])
Code List
Corticosteroid dose
CL Item
Unchanged (1)
CL Item
>= 50% reduction (2)
CL Item
Stopp (3)
CL Item
Unknown (4)
Item
Cyclosporine dose
integer
C0010592 (UMLS CUI [1,1])
C3174092 (UMLS CUI [1,2])
Code List
Cyclosporine dose
CL Item
Unchanged (1)
CL Item
>= 50% reduction (2)
CL Item
Stopp (3)
CL Item
Unknown (4)
Item
mTOR-Inhibitor dose
integer
C2746052 (UMLS CUI [1,1])
C3174092 (UMLS CUI [1,2])
Code List
mTOR-Inhibitor dose
CL Item
Unchanged (1)
CL Item
>= 50% reduction (2)
CL Item
Stopp (3)
CL Item
Unknown (4)
Item
Mycophenolic acid/mycofenolate mofetil dose
integer
C0026933 (UMLS CUI [1,1])
C3174092 (UMLS CUI [1,2])
C0209368 (UMLS CUI [2,1])
C3174092 (UMLS CUI [2,2])
Code List
Mycophenolic acid/mycofenolate mofetil dose
CL Item
Unchanged (1)
CL Item
>= 50% reduction (2)
CL Item
Stopp (3)
CL Item
Unknown (4)
Item
Tacrolimus dose
integer
C0085149 (UMLS CUI [1,1])
C3174092 (UMLS CUI [1,2])
Code List
Tacrolimus dose
CL Item
Unchanged (1)
CL Item
>= 50% reduction (2)
CL Item
Stopp (3)
CL Item
Unknown (4)
Item
Other
integer
C0205394 (UMLS CUI [1,1])
C0087111 (UMLS CUI [1,2])
C0029216 (UMLS CUI [1,3])
Code List
Other
CL Item
Unchanged (1)
CL Item
>= 50% reduction (2)
CL Item
Stopp (3)
CL Item
Unknown (4)
Item Group
Is data entry for this section finished?
C4684556 (UMLS CUI-1)
C1828479 (UMLS CUI-2)
C0205197 (UMLS CUI-3)
Item
Is data entry for this section finished?
integer
C4684556 (UMLS CUI [1,1])
C1828479 (UMLS CUI [1,2])
C0205197 (UMLS CUI [1,3])
Code List
Is data entry for this section finished?
CL Item
Yes (1)
CL Item
No (2)