OMOP Common Data Model (CDM) Concept

Concept
Beschrijving

Concept

Alias
UMLS CUI-1
C0178566
UMLS CUI-2
C2708733
UMLS CUI-3
C1955348
concept ID
Beschrijving

A unique identifier for each concept across all domains. For all Concepts, whether they are custom generated or adopted from published terminologies, a unique numeric identifier concept_id is assigned and used as the key to link all observational data to the corresponding Concept reference data. The concept_id of a Concept is persistent, i.e. stays the same for the same Concept between releases of the Standardized Vocabularies. Values for CONCEPT_IDs generated as part of Standardized Vocabularies will be reserved from 0 to 2,000,000,000. Above this range, CONCEPT_IDs are available for local use and are guaranteed not to clash with future releases of the Standardized Vocabularies.

Datatype

integer

Alias
UMLS CUI [1,1]
C0178566
UMLS CUI [1,2]
C1300638
concept name
Beschrijving

An unambiguous, meaningful and descriptive name for the concept.

Datatype

text

Alias
UMLS CUI [1,1]
C0178566
UMLS CUI [1,2]
C0027365
Domain ID
Beschrijving

A foreign key to the DOMAIN table the Concept belongs to.

Datatype

text

Alias
UMLS CUI [1,1]
C1883204
UMLS CUI [1,2]
C1300638
Vocabulary ID
Beschrijving

A foreign key to the vocabulary table indicating from which source the concept has been adapted.

Datatype

text

Alias
UMLS CUI [1,1]
C0042926
UMLS CUI [1,2]
C1300638
Concept class ID
Beschrijving

The attribute or concept class of the Concept. Examples are 'Clinical Drug', 'Ingredient', 'Clinical Finding' etc. Concept Class attributes should not be confused with Classification Concepts. These are separate Concepts that have a hierarchical relationship to Standard Concepts or each other, while Concept Classes are unique Vocabulary-specific attributes for each Concept. Standard Concepts (designated as 'S' in the standard_concept field) may appear in CDM tables in all *_concept_id fields, whereas Classification Concepts ('C') should not appear in the CDM data, but participate in the construction of the CONCEPT_ANCESTOR table and can be used to identify Descendants that may appear in the data. See CONCEPT_ANCESTOR table. Non-standard Concepts can only appear in *_source_concept_id fields and are not used in CONCEPT_ANCESTOR table. Please refer to the Standardized Vocabularies specifications for details of the Standard Concept designation.

Datatype

text

Alias
UMLS CUI [1,1]
C0178566
UMLS CUI [1,2]
C0456387
UMLS CUI [1,3]
C1300638
Standard concept
Beschrijving

This flag determines where a Concept is a Standard Concept, i.e. is used in the data, a Classification Concept, or a non-standard Source Concept. The allowables values are 'S' (Standard Concept) and 'C' (Classification Concept), otherwise the content is NULL.

Datatype

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0178566
Concept code
Beschrijving

The concept code represents the identifier of the Concept in the source vocabulary, such as SNOMED-CT concept IDs, RxNorm RXCUIs etc. Note that concept codes are not unique across vocabularies. For Concepts inherited from published terminologies, the source code is retained in the concept_code field and can be used to reference the source vocabulary.

Datatype

text

Alias
UMLS CUI [1,1]
C0178566
UMLS CUI [1,2]
C0805701
valid start date
Beschrijving

The date when the Concept was first recorded. The default value is 1-Jan-1970, meaning, the Concept has no (known) date of inception. Concepts without a known instantiated date are assigned valid_start_date of '1-Jan-1970'.

Datatype

date

Alias
UMLS CUI [1,1]
C0178566
UMLS CUI [1,2]
C2349101
UMLS CUI [1,3]
C0808070
valid end date
Beschrijving

The date when the Concept became invalid because it was deleted or superseded (updated) by a new concept. The default value is 31-Dec-2099, meaning, the Concept is valid until it becomes deprecated. Concepts that are not invalid are assigned valid_end_date of '31-Dec-2099'.

Datatype

date

Alias
UMLS CUI [1,1]
C0178566
UMLS CUI [1,2]
C2349101
UMLS CUI [1,3]
C0806020
invalid reason
Beschrijving

Reason the Concept was invalidated. Possible values are D (deleted), U (replaced with an update) or NULL when valid_end_date has the default value. Deprecated Concepts (with a valid_end_date before the release date of the Standardized Vocabularies) will have a value of 'D' (deprecated without successor) or 'U' (updated). The updated Concepts have a record in the CONCEPT_RELATIONSHIP table indicating their active replacement Concept.

Datatype

text

Alias
UMLS CUI [1,1]
C0178566
UMLS CUI [1,2]
C3245471
UMLS CUI [1,3]
C0566251

Similar models

OMOP Common Data Model (CDM) Concept

Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
Concept
C0178566 (UMLS CUI-1)
C2708733 (UMLS CUI-2)
C1955348 (UMLS CUI-3)
concept ID
Item
concept ID
integer
C0178566 (UMLS CUI [1,1])
C1300638 (UMLS CUI [1,2])
concept name
Item
concept name
text
C0178566 (UMLS CUI [1,1])
C0027365 (UMLS CUI [1,2])
Domain ID
Item
Domain ID
text
C1883204 (UMLS CUI [1,1])
C1300638 (UMLS CUI [1,2])
Vocabulary ID
Item
Vocabulary ID
text
C0042926 (UMLS CUI [1,1])
C1300638 (UMLS CUI [1,2])
Concept class ID
Item
Concept class ID
text
C0178566 (UMLS CUI [1,1])
C0456387 (UMLS CUI [1,2])
C1300638 (UMLS CUI [1,3])
Standard concept
Item
Standard concept
text
C0034925 (UMLS CUI [1,1])
C0178566 (UMLS CUI [1,2])
Concept code
Item
Concept code
text
C0178566 (UMLS CUI [1,1])
C0805701 (UMLS CUI [1,2])
valid start date
Item
valid start date
date
C0178566 (UMLS CUI [1,1])
C2349101 (UMLS CUI [1,2])
C0808070 (UMLS CUI [1,3])
valid end date
Item
valid end date
date
C0178566 (UMLS CUI [1,1])
C2349101 (UMLS CUI [1,2])
C0806020 (UMLS CUI [1,3])
invalid reason
Item
invalid reason
text
C0178566 (UMLS CUI [1,1])
C3245471 (UMLS CUI [1,2])
C0566251 (UMLS CUI [1,3])