Date of Sputum induction
Item
Date of assessment (Sputum induction)
date
C2985720 (UMLS CUI [1,1])
C0038056 (UMLS CUI [1,2])
Item
Planned relative time
text
C0439564 (UMLS CUI [1,1])
C0429706 (UMLS CUI [1,2])
Code List
Planned relative time
CL Item
pre-bronchdilator (pre-bronchdilator)
CL Item
administration (no FEV1 meassurement) (administration (no FEV1 meassurement))
CL Item
post-bronchodilator (post-bronchodilator)
Time of First Reading
Item
Actual Time of First Reading
time
C0040223 (UMLS CUI [1,1])
C0429706 (UMLS CUI [1,2])
FEV1 Reading 1
Item
FEV1 Reading 1
float
C0456984 (UMLS CUI [1,1])
C0429706 (UMLS CUI [1,2])
FEV1 Reading 2
Item
FEV1 Reading 2
float
C0456984 (UMLS CUI [1,1])
C0429706 (UMLS CUI [1,2])
FEV1 Reading 3
Item
FEV1 Reading 3
float
C0456984 (UMLS CUI [1,1])
C0429706 (UMLS CUI [1,2])
Postbronchodilator FEV1 -20%
Item
Postbronchodilator FEV1 -20%
float
C2599594 (UMLS CUI [1,1])
C0429706 (UMLS CUI [1,2])
Postbronchodilator FEV1 -10%
Item
Postbronchodilator FEV1 -10%
float
C2599594 (UMLS CUI [1,1])
C0429706 (UMLS CUI [1,2])
Item
Planned relative Time
text
C0439564 (UMLS CUI [1,1])
C0205535 (UMLS CUI [1,2])
Code List
Planned relative Time
CL Item
Inhalation Period 1 (Inhalation Period 1)
CL Item
Inhalation Period 2 (Inhalation Period 2)
CL Item
Inhalation Period 3 (Inhalation Period 3)
CL Item
Unscheduled (Unscheduled)
Actual Time of Inhalation
Item
Actual Time of Inhalation
time
C0040223 (UMLS CUI [1,1])
C0001559 (UMLS CUI [1,2])
Saline Concentration
Item
Saline Concentration
float
C0036082 (UMLS CUI [1])
FEV1
Item
FEV1
float
C0748133 (UMLS CUI [1])
Bronchodilator administration
Item
Was Bronchodilator administered?
boolean
C0006280 (UMLS CUI [1,1])
C1533734 (UMLS CUI [1,2])
Dose administered
Item
Dose administered
float
C0006280 (UMLS CUI [1,1])
C3174092 (UMLS CUI [1,2])
Date of assessment
Item
Date of assessment
date
C2985720 (UMLS CUI [1])
Time sample Collected
Item
Time sample Collected
time
C0040223 (UMLS CUI [1,1])
C0200345 (UMLS CUI [1,2])
C0038056 (UMLS CUI [1,3])
Time sample processed
Item
Time sample processed
time
C0040223 (UMLS CUI [1,1])
C1709694 (UMLS CUI [1,2])
C0038056 (UMLS CUI [1,3])
Sputum Sample Quality
Item
Following visual examination / inspection, record below the color, purulence and any signs of blood contamination:
text
C0038056 (UMLS CUI [1,1])
C0332306 (UMLS CUI [1,2])
C1880121 (UMLS CUI [2])
C0241235 (UMLS CUI [3])
C0005767 (UMLS CUI [4,1])
C2349974 (UMLS CUI [4,2])
Sample Weight - Weight of tube
Item
Sample Weight - Weight of tube
float
C0807984 (UMLS CUI [1,1])
C0175730 (UMLS CUI [1,2])
Sample Weight - Weight of tube + Sputum
Item
Sample Weight - Weight of tube + Sputum
float
C0807984 (UMLS CUI [1,1])
C0175730 (UMLS CUI [1,2])
C0038056 (UMLS CUI [1,3])
Sample Weight - Weight of Sputum
Item
Sample Weight - Weight of Sputum
float
C0807984 (UMLS CUI [1,1])
C0038056 (UMLS CUI [1,2])
Volume of DTT added
Item
Volume of DTT added
float
C0012789 (UMLS CUI [1,1])
C2700258 (UMLS CUI [1,2])
Volume of PBS Added
Item
Volume of PBS Added
float
C2700258 (UMLS CUI [1,1])
C0036082 (UMLS CUI [1,2])
C0991865 (UMLS CUI [1,3])
Resuspension Volume
Item
Resuspension Volume
float
C2700258 (UMLS CUI [1,1])
C0439810 (UMLS CUI [1,2])
Item
Squares Counted
text
C3856621 (UMLS CUI [1])
Code List
Squares Counted
CL Item
Bottom left 4x4 (Bottom left 4x4)
CL Item
Bottom right 4x4 (Bottom right 4x4)
CL Item
Top left 4x4 (Top left 4x4)
CL Item
Top right 4x4 (Top right 4x4)
CL Item
Average (Average)
Viable Leukocytes
Item
Viable Leukocytes
integer
C0023508 (UMLS CUI [1,1])
C0443348 (UMLS CUI [1,2])
Dead Leukocytes
Item
Dead Leukocytes
integer
C0023508 (UMLS CUI [1,1])
C1306577 (UMLS CUI [1,2])
Total Leukocyte Count
Item
Total Leukocyte Count
float
C0023508 (UMLS CUI [1,1])
C0439810 (UMLS CUI [1,2])
Total Viable Leukocytes
Item
Total Viable Leukocytes
float
C0023508 (UMLS CUI [1,1])
C0443348 (UMLS CUI [1,2])
C0439810 (UMLS CUI [1,3])
Percent Viable Leukocytes
Item
Percent Viable Leukocytes
float
C0023508 (UMLS CUI [1,1])
C0443348 (UMLS CUI [1,2])
C0439165 (UMLS CUI [1,3])
Date of assessment
Item
Date of assessment
date
C2985720 (UMLS CUI [1])
Time sample collected
Item
Time sample collected
time
C0040223 (UMLS CUI [1,1])
C0200345 (UMLS CUI [1,2])
Resuspension volume
Item
Resuspension volume
float
C2700258 (UMLS CUI [1,1])
C1382107 (UMLS CUI [1,2])
Weight of Sputum
Item
Weight of Sputum
float
C0807984 (UMLS CUI [1,1])
C0038056 (UMLS CUI [1,2])
Total Leukocyte Count
Item
Total Leukocyte Count
float
C0023508 (UMLS CUI [1,1])
C0439810 (UMLS CUI [1,2])
Number of Cytospin slides prepared
Item
Number of Cytospin slides prepared
integer
C3897072 (UMLS CUI [1,1])
C0750480 (UMLS CUI [1,2])
C4082130 (UMLS CUI [1,3])
Number of Cytospin slides stained
Item
Number of Cytospin slides stained
integer
C3897072 (UMLS CUI [1,1])
C0750480 (UMLS CUI [1,2])
C0038128 (UMLS CUI [1,3])
Number of supernatant aliquots saved
Item
Number of supernatant aliquots saved
integer
C0237753 (UMLS CUI [1,1])
C1510844 (UMLS CUI [1,2])
C1550101 (UMLS CUI [1,3])
C0003738 (UMLS CUI [1,4])
Item
Does any of the sample have under 50 percent viability (hemacytometer) or over 40 percent squamous cells (cytospin slide)?
text
C1274040 (UMLS CUI [1,1])
C0007634 (UMLS CUI [1,2])
C0443348 (UMLS CUI [1,3])
C0439165 (UMLS CUI [1,4])
C0439165 (UMLS CUI [2,1])
C2699511 (UMLS CUI [2,2])
Code List
Does any of the sample have under 50 percent viability (hemacytometer) or over 40 percent squamous cells (cytospin slide)?
Date Sputum (supernatant) sample taken
Item
Date Sputum (supernatant) sample taken
date
C1302413 (UMLS CUI [1,1])
C0038056 (UMLS CUI [1,2])
Time of sampling
Item
Actual time of sampling
time
C0040223 (UMLS CUI [1,1])
C0870078 (UMLS CUI [1,2])
C0038056 (UMLS CUI [1,3])
Date of assessment
Item
Date of assessment
date
C2985720 (UMLS CUI [1,1])
C3897072 (UMLS CUI [1,2])
Item
Number of Reader
integer
C2986556 (UMLS CUI [1])
C2986556 (UMLS CUI [2])
Code List
Number of Reader
Name of Reader
Item
Name of Reader
text
C2826892 (UMLS CUI [1])
Item
Slide number
integer
C3897072 (UMLS CUI [1,1])
C0237753 (UMLS CUI [1,2])
Absolute count of Eosinophils
Item
Absolute count of Eosinophils
integer
C0200638 (UMLS CUI [1])
Absolute count of Neutrophils
Item
Absolute count of Neutrophils
integer
C0948762 (UMLS CUI [1])
Absolute count of Macrophages
Item
Absolute count of Macrophages
integer
C1294065 (UMLS CUI [1])
Absolute count of Lymphocytes
Item
Absolute count of Lymphocytes
integer
C3544087 (UMLS CUI [1])
Absolute count of Bronchial epithelial cells
Item
Absolute count of Bronchial epithelial cells
integer
C1273342 (UMLS CUI [1,1])
C0205039 (UMLS CUI [1,2])
Absolute count of squamous cells
Item
Absolute count of squamous cells
integer
C2699511 (UMLS CUI [1])
Total non-squamous cells
Item
Total non-squamous cells
integer
C0007584 (UMLS CUI [1,1])
C1545484 (UMLS CUI [1,2])
C0439810 (UMLS CUI [1,3])
Total cells
Item
Total cells
integer
C0007584 (UMLS CUI [1,1])
C0439810 (UMLS CUI [1,2])
Eosinophils: percent of total non squamous cells
Item
Eosinophils: percent of total non squamous cells
float
C0200638 (UMLS CUI [1,1])
C0439165 (UMLS CUI [1,2])
Neutrophils: percent of total non squamous cells
Item
Neutrophils: percent of total non squamous cells
float
C0948762 (UMLS CUI [1,1])
C0439165 (UMLS CUI [1,2])
Macrophages: percent of total non squamous cells
Item
Macrophages: percent of total non squamous cells
float
C1294065 (UMLS CUI [1,1])
C0439165 (UMLS CUI [1,2])
Lymphocytes: percent of total non squamous cells
Item
Lymphocytes: percent of total non squamous cells
float
C3544087 (UMLS CUI [1,1])
C0439165 (UMLS CUI [1,2])
Bronchial epithelial cells: percent of total non squamous cells
Item
Bronchial epithelial cells: percent of total non squamous cells
float
C1273342 (UMLS CUI [1,1])
C0205039 (UMLS CUI [1,2])
C0439165 (UMLS CUI [1,3])