ID

23154

Description

Swabs form of SHIP Study (Study of Health in Pomerania), conducted by the University of Greifswald. SHIP unique domain name TREND.TREND1.MEX.BIOMAT.ABSTRICHE. ODM derived from https://www.fvcm.med.uni-greifswald.de/dd_service/data_use_explore.php. Further information: http://www2.medizin.uni-greifswald.de/cm/fv/ship.html. Publication granted by Prof. Völzke. Reference: Völzke H, et al. Cohort profile: the study of health in Pomerania. Int J Epidemiol. 2011;40(2):294-307. PMID: 20167617

Link

https://www.fvcm.med.uni-greifswald.de/dd_service/data_use_explore.php

Keywords

Versions (6)
  1. 4/12/17 4/12/17 -
  2. 4/26/17 4/26/17 -
  3. 6/26/17 6/26/17 -
  4. 10/30/17 10/30/17 -
  5. 11/2/17 11/2/17 -
  6. 1/20/21 1/20/21 -
Copyright Holder

University of Greifswald

Uploaded on

June 26, 2017

DOI

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License

Creative Commons BY-NC 3.0
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medical examination SHIP-Trend-1 Swabs

German English Portuguese

Swabs

1 forms  
  1. StudyEvent: ODM
    1. Swabs
Swabs
Description

Swabs

Alias
UMLS CUI-1
C0444186
begin
Description

swb_beg - Start date and time

Data type

datetime

Alias
UMLS CUI [1]
C3897500
examiner
Description

swb_usnr - Examiner ID

Data type

integer

Alias
UMLS CUI [1,1]
C1704312
UMLS CUI [1,2]
C0600091
assistant
Description

swb_assistant

Data type

integer

Alias
UMLS CUI [1]
C0334914
scan KIS case no
Description

swb_fall - Hospital Information Systems Case ID

Data type

float

Alias
UMLS CUI [1,1]
C0019972
UMLS CUI [1,2]
C1827405
scan swab tube
Description

swb_tube - Swabs, Specimen Collection/Transportation , scan

Data type

float

Alias
UMLS CUI [1,1]
C0441633
UMLS CUI [1,2]
C0879212
swabs: scan nasal swab tube
Description

swb_nose_tube - Swabs, Specimen Collection/Transportation of nasal swabs scan

Data type

float

Alias
UMLS CUI [1,1]
C0441633
UMLS CUI [1,2]
C0879212
UMLS CUI [1,3]
C0879240
remarks
Description

swb_bsnr - Occurrence Indicator

Data type

integer

Alias
UMLS CUI [1]
C2826183
notes
Description

swb_note - Special details

Data type

text

Alias
UMLS CUI [1,1]
C1522508
UMLS CUI [1,2]
C0947611
Did you eat during the past 30 min?
Description

swb_eat - did you eat within past 30 minutes?

Data type

integer

Alias
UMLS CUI [1,1]
C0013470
UMLS CUI [1,2]
C0456693
Did you have a drink other than water during the past 30 min?
Description

swb_drink - did you drink anything else than water within past 30 min?

Data type

integer

Alias
UMLS CUI [1,1]
C0599638
UMLS CUI [1,2]
C0456693
saliva sample paraffin
Description

swb_saliva_paraffin

Data type

integer

Alias
UMLS CUI [1,1]
C0438730
UMLS CUI [1,2]
C4057692
reason for missing saliva sample (paraffin)
Description

swb_saliva_paraffin_note - reason for not taking saliva specimen

Data type

text

Alias
UMLS CUI [1,1]
C0438730
UMLS CUI [1,2]
C4057692
UMLS CUI [1,3]
C2826287
end saliva sample paraffin
Description

swb_end_paraffin - end date and time of saliva test

Data type

datetime

Alias
UMLS CUI [1,1]
C3899266
UMLS CUI [1,2]
C0438730
UMLS CUI [1,3]
C4057692
begin classical swabs
Description

swb_beg_classic - start date and time of traditional swabs

Data type

datetime

Alias
UMLS CUI [1,1]
C3897500
UMLS CUI [1,2]
C0183753
swabs: nasal swab
Description

swb_nase - nasal swab

Data type

integer

Alias
UMLS CUI [1]
C0879240
swabs: cause for missing nasal swab
Description

swb_nase_note - reason for not taking nasal swab

Data type

text

Alias
UMLS CUI [1,1]
C2826287
UMLS CUI [1,2]
C0879240
lingual swab
Description

swb_zung - tongue swab

Data type

integer

Alias
UMLS CUI [1]
C3532394
reason for missing lingual swab
Description

swb_zung_note - reason for not taking tongue swab

Data type

text

Alias
UMLS CUI [1,1]
C3532394
UMLS CUI [1,2]
C2826287
saliva sample
Description

swb_saliva - saliva specimen

Data type

integer

Alias
UMLS CUI [1]
C0438730
reason for missing saliva sample
Description

swb_saliva_note - reason for not taking saliva specimen

Data type

text

Alias
UMLS CUI [1,1]
C0438730
UMLS CUI [1,2]
C2826287
periodontal swab, tooth 1
Description

swb_tooth1 - Periodontal Pocket smear test, first tooth

Data type

integer

Alias
UMLS CUI [1,1]
C0031094
UMLS CUI [1,2]
C0444186
UMLS CUI [1,3]
C4040620
periodontal swab, tooth 1; quadrant
Description

swb_tooth1_quad - periodontal pocket smear test of first tooth, quadrant number

Data type

integer

Alias
UMLS CUI [1,1]
C0031094
UMLS CUI [1,2]
C0444186
UMLS CUI [1,3]
C4040620
UMLS CUI [1,4]
C1631280
periodontal swab, tooth 1; tooth
Description

swb_tooth1_tooth - periodontal pocket smear test of first tooth

Data type

integer

Alias
UMLS CUI [1,1]
C0031094
UMLS CUI [1,2]
C0444186
UMLS CUI [1,3]
C4040620
periodontal swab, tooth 1; bleeding
Description

swb_tooth1_blt - periodontal pocket smear test of first tooth, bleeding

Data type

integer

Alias
UMLS CUI [1,1]
C0031094
UMLS CUI [1,2]
C0444186
UMLS CUI [1,3]
C4040620
UMLS CUI [1,4]
C0376349
periodontal swab, tooth 2
Description

swb_tooth2 - Periodontal Pocket smear test,second tooth

Data type

integer

Alias
UMLS CUI [1,1]
C0031094
UMLS CUI [1,2]
C0444186
UMLS CUI [1,3]
C4040620
periodontal swab, tooth 2; quadrant
Description

swb_tooth2_quad - Periodontal Pocket smear test,second tooth quadrant

Data type

integer

Alias
UMLS CUI [1,1]
C0031094
UMLS CUI [1,2]
C0444186
UMLS CUI [1,3]
C4040620
UMLS CUI [1,4]
C1631280
periodontal swab, tooth 2; tooth
Description

swb_tooth2_tooth - Periodontal Pocket smear test,second tooth

Data type

integer

Alias
UMLS CUI [1,1]
C0031094
UMLS CUI [1,2]
C0444186
UMLS CUI [1,3]
C4040620
periodontal swab, tooth 2; bleeding
Description

swb_tooth2_blt - periodontal pocket smear test of second tooth, bleeding

Data type

integer

Alias
UMLS CUI [1,1]
C0031094
UMLS CUI [1,2]
C0444186
UMLS CUI [1,3]
C4040620
UMLS CUI [1,4]
C0376349
toothless upper quadrant
Description

swb_teeth_upper_noteeth- Maxillary toothless quadrant

Data type

integer

Alias
UMLS CUI [1,1]
C0024947
UMLS CUI [1,2]
C0457756
toothless lower quadrant
Description

swb_teeth_lower_noteeth - mandible toothless quadrant

Data type

integer

Alias
UMLS CUI [1,1]
C0024687
UMLS CUI [1,2]
C0457756
other reasons for missing periodontal swab
Description

swb_teeth_misc - reason for not performing periodontal pocket smear

Data type

integer

Alias
UMLS CUI [1,1]
C0031094
UMLS CUI [1,2]
C0444186
UMLS CUI [1,3]
C2826287
other reasons; notes
Description

swb_teeth_note

Data type

text

end
Description

swb_end - end date and time

Data type

datetime

Alias
UMLS CUI [1]
C3899266
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Similar models

Swabs

1 forms
  1. StudyEvent: ODM
    1. Swabs
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Swabs
C0444186 (UMLS CUI-1)
swb_beg - Start date and time
Item
begin
datetime
C3897500 (UMLS CUI [1])
swb_usnr - Examiner ID
Item
examiner
integer
C1704312 (UMLS CUI [1,1])
C0600091 (UMLS CUI [1,2])
swb_assistant
Item
assistant
integer
C0334914 (UMLS CUI [1])
swb_fall - Hospital Information Systems Case ID
Item
scan KIS case no
float
C0019972 (UMLS CUI [1,1])
C1827405 (UMLS CUI [1,2])
swb_tube - Swabs, Specimen Collection/Transportation , scan
Item
scan swab tube
float
C0441633 (UMLS CUI [1,1])
C0879212 (UMLS CUI [1,2])
swb_nose_tube - Swabs, Specimen Collection/Transportation of nasal swabs scan
Item
swabs: scan nasal swab tube
float
C0441633 (UMLS CUI [1,1])
C0879212 (UMLS CUI [1,2])
C0879240 (UMLS CUI [1,3])
Item
remarks
integer
C2826183 (UMLS CUI [1])
remarks
Code List
remarks
CL Item
no remarks (0)
C2826183 (UMLS CUI-1)
C1298908 (UMLS CUI-2)
CL Item
remarks (1)
C2826183 (UMLS CUI-1)
C1705108 (UMLS CUI-2)
swb_note - Special details
Item
notes
text
C1522508 (UMLS CUI [1,1])
C0947611 (UMLS CUI [1,2])
Item
Did you eat during the past 30 min?
integer
C0013470 (UMLS CUI [1,1])
C0456693 (UMLS CUI [1,2])
Did you eat during the past 30 min?
Code List
Did you eat during the past 30 min?
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
Item
Did you have a drink other than water during the past 30 min?
integer
C0599638 (UMLS CUI [1,1])
C0456693 (UMLS CUI [1,2])
Did you eat during the past 30 min?
Code List
Did you have a drink other than water during the past 30 min?
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
Item
saliva sample paraffin
integer
C0438730 (UMLS CUI [1,1])
C4057692 (UMLS CUI [1,2])
saliva sample paraffin
Code List
saliva sample paraffin
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
CL Item
Refusal (9)
C0040809 (UMLS CUI-1)
swb_saliva_paraffin_note - reason for not taking saliva specimen
Item
reason for missing saliva sample (paraffin)
text
C0438730 (UMLS CUI [1,1])
C4057692 (UMLS CUI [1,2])
C2826287 (UMLS CUI [1,3])
swb_end_paraffin - end date and time of saliva test
Item
end saliva sample paraffin
datetime
C3899266 (UMLS CUI [1,1])
C0438730 (UMLS CUI [1,2])
C4057692 (UMLS CUI [1,3])
swb_beg_classic - start date and time of traditional swabs
Item
begin classical swabs
datetime
C3897500 (UMLS CUI [1,1])
C0183753 (UMLS CUI [1,2])
Item
swabs: nasal swab
integer
C0879240 (UMLS CUI [1])
saliva sample paraffin
Code List
swabs: nasal swab
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
CL Item
Refusal (9)
C0040809 (UMLS CUI-1)
swb_nase_note - reason for not taking nasal swab
Item
swabs: cause for missing nasal swab
text
C2826287 (UMLS CUI [1,1])
C0879240 (UMLS CUI [1,2])
Item
lingual swab
integer
C3532394 (UMLS CUI [1])
saliva sample paraffin
Code List
lingual swab
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
CL Item
Refusal (9)
C0040809 (UMLS CUI-1)
swb_zung_note - reason for not taking tongue swab
Item
reason for missing lingual swab
text
C3532394 (UMLS CUI [1,1])
C2826287 (UMLS CUI [1,2])
Item
saliva sample
integer
C0438730 (UMLS CUI [1])
saliva sample paraffin
Code List
saliva sample
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
CL Item
Refusal (9)
C0040809 (UMLS CUI-1)
swb_saliva_note - reason for not taking saliva specimen
Item
reason for missing saliva sample
text
C0438730 (UMLS CUI [1,1])
C2826287 (UMLS CUI [1,2])
Item
periodontal swab, tooth 1
integer
C0031094 (UMLS CUI [1,1])
C0444186 (UMLS CUI [1,2])
C4040620 (UMLS CUI [1,3])
saliva sample paraffin
Code List
periodontal swab, tooth 1
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
CL Item
Refusal (9)
C0040809 (UMLS CUI-1)
Item
periodontal swab, tooth 1; quadrant
integer
C0031094 (UMLS CUI [1,1])
C0444186 (UMLS CUI [1,2])
C4040620 (UMLS CUI [1,3])
C1631280 (UMLS CUI [1,4])
periodontal swab, tooth 1; quadrant
Code List
periodontal swab, tooth 1; quadrant
CL Item
1st quadrant (1)
C0439734 (UMLS CUI-1)
CL Item
2nd quadrant (2)
C0439735 (UMLS CUI-1)
CL Item
3rd quadrant (3)
C0439736 (UMLS CUI-1)
CL Item
4th quadrant (4)
C0439737 (UMLS CUI-1)
Item
periodontal swab, tooth 1; tooth
integer
C0031094 (UMLS CUI [1,1])
C0444186 (UMLS CUI [1,2])
C4040620 (UMLS CUI [1,3])
periodontal swab, tooth 1; tooth
Code List
periodontal swab, tooth 1; tooth
CL Item
1st tooth (1)
C4040620 (UMLS CUI-1)
C0205435 (UMLS CUI-2)
CL Item
2nd tooth (2)
C4040620 (UMLS CUI-1)
C0205436 (UMLS CUI-2)
CL Item
3rd tooth (3)
C4040620 (UMLS CUI-1)
C0205437 (UMLS CUI-2)
CL Item
4th tooth (4)
C4040620 (UMLS CUI-1)
C0205438 (UMLS CUI-2)
CL Item
5th tooth (5)
C4040620 (UMLS CUI-1)
C0205439 (UMLS CUI-2)
CL Item
6th tooth (6)
C4040620 (UMLS CUI-1)
C0205440 (UMLS CUI-2)
CL Item
7th tooth (7)
C4040620 (UMLS CUI-1)
C0205441 (UMLS CUI-2)
Item
periodontal swab, tooth 1; bleeding
integer
C0031094 (UMLS CUI [1,1])
C0444186 (UMLS CUI [1,2])
C4040620 (UMLS CUI [1,3])
C0376349 (UMLS CUI [1,4])
Did you eat during the past 30 min?
Code List
periodontal swab, tooth 1; bleeding
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
Item
periodontal swab, tooth 2
integer
C0031094 (UMLS CUI [1,1])
C0444186 (UMLS CUI [1,2])
C4040620 (UMLS CUI [1,3])
saliva sample paraffin
Code List
periodontal swab, tooth 2
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
CL Item
Refusal (9)
C0040809 (UMLS CUI-1)
Item
periodontal swab, tooth 2; quadrant
integer
C0031094 (UMLS CUI [1,1])
C0444186 (UMLS CUI [1,2])
C4040620 (UMLS CUI [1,3])
C1631280 (UMLS CUI [1,4])
periodontal swab, tooth 1; quadrant
Code List
periodontal swab, tooth 2; quadrant
CL Item
1st quadrant (1)
C0439734 (UMLS CUI-1)
CL Item
2nd quadrant (2)
C0439735 (UMLS CUI-1)
CL Item
3rd quadrant (3)
C0439736 (UMLS CUI-1)
CL Item
4th quadrant (4)
C0439737 (UMLS CUI-1)
Item
periodontal swab, tooth 2; tooth
integer
C0031094 (UMLS CUI [1,1])
C0444186 (UMLS CUI [1,2])
C4040620 (UMLS CUI [1,3])
periodontal swab, tooth 1; tooth
Code List
periodontal swab, tooth 2; tooth
CL Item
1st tooth (1)
C4040620 (UMLS CUI-1)
C0205435 (UMLS CUI-2)
CL Item
2nd tooth (2)
C4040620 (UMLS CUI-1)
C0205436 (UMLS CUI-2)
CL Item
3rd tooth (3)
C4040620 (UMLS CUI-1)
C0205437 (UMLS CUI-2)
CL Item
4th tooth (4)
C4040620 (UMLS CUI-1)
C0205438 (UMLS CUI-2)
CL Item
5th tooth (5)
C4040620 (UMLS CUI-1)
C0205439 (UMLS CUI-2)
CL Item
6th tooth (6)
C4040620 (UMLS CUI-1)
C0205440 (UMLS CUI-2)
CL Item
7th tooth (7)
C4040620 (UMLS CUI-1)
C0205441 (UMLS CUI-2)
Item
periodontal swab, tooth 2; bleeding
integer
C0031094 (UMLS CUI [1,1])
C0444186 (UMLS CUI [1,2])
C4040620 (UMLS CUI [1,3])
C0376349 (UMLS CUI [1,4])
Did you eat during the past 30 min?
Code List
periodontal swab, tooth 2; bleeding
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
Item
toothless upper quadrant
integer
C0024947 (UMLS CUI [1,1])
C0457756 (UMLS CUI [1,2])
Did you eat during the past 30 min?
Code List
toothless upper quadrant
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
Item
toothless lower quadrant
integer
C0024687 (UMLS CUI [1,1])
C0457756 (UMLS CUI [1,2])
Did you eat during the past 30 min?
Code List
toothless lower quadrant
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
Item
other reasons for missing periodontal swab
integer
C0031094 (UMLS CUI [1,1])
C0444186 (UMLS CUI [1,2])
C2826287 (UMLS CUI [1,3])
Did you eat during the past 30 min?
Code List
other reasons for missing periodontal swab
CL Item
No (0)
C1298908 (UMLS CUI-1)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
swb_teeth_note
Item
other reasons; notes
text
swb_end - end date and time
Item
end
datetime
C3899266 (UMLS CUI [1])
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